<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP25054

Description GL14918
SequenceMSSSNGNGNSAPSNEQQQQHQAGAAGPGAAATSGPEEVAGGGFSTRPATAPARTTDPSNNNNNNNNNNNNNNSTTTSSSTSYRVNLSNINNNSSNSNNNTSSRQASNNNHNESSTGLVVNTGATTATPAATATATATGNATATATTSSNNNHIYVNPHSYDSSTTGSASGSTAVMLPQPQPQPQPLPLPLPLSNPLTLQLPLPPGGGDRDNYLLQQQQLNTGAISRTGTSTSTTLSTLNTYLFPCGASDSAGTLGGGSCDLDSNFSQMVNGAGSSEAGSSFSQSTAPAGLGMGLGVQLGLGFISGRRRIRRLFGVAEPNLGTNGGGAGANPYAAATLRRRSSQLGQFGKRRERERERELEEIEQQQRIATVASANAAFLERREMQLQQQQQQHLQHLQHQQQQQYLPQQQPQQQQQQIQFMFNPMHQEPQKKKKKKPPGPPAQARQQSSRTMDDPMMNRPRKGTPAKKDKKAAPENPYEKYHQITIQNQIKIKIRASQSTSKPLFSHLSHLASKPTAKRKL
Length521
PositionKinase
OrganismDrosophila persimilis (Fruit fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Ephydroidea> Drosophilidae> Drosophila> Sophophora.
Aromaticity0.04
Grand average of hydropathy-0.943
Instability index62.01
Isoelectric point10.11
Molecular weight55511.13
Publications
PubMed=17994087

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP25054
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     164.16|      40|      40|      59|      98|       1
---------------------------------------------------------------------------
    4-   86 (49.26/18.90)	SNGNGNSAPSNEqqqqhqagaagpgaaatsgpeevagggfstrpataparttdpsNNNNNNNNNN.....NNNNSTTTSSSTSYRVNL
   87-  137 (51.87/20.28)	SNINNNSSNSNN.....................................ntssrqASNNNHNESStglvvNTGATTATPAATATATAT
  138-  176 (63.03/26.15)	GNATATATTSSN............................................NNHIYVNPH.....SYDSSTTGSASGSTAVML
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     121.67|      25|      25|     379|     403|       2
---------------------------------------------------------------------------
  337-  368 (30.55/11.78)	LRRRSSQLGQfgkrrerERERELEEIEQQQRI
  379-  403 (45.30/20.48)	LERREMQLQQ.......QQQQHLQHLQHQQQQ
  406-  430 (45.82/20.79)	LPQQQPQQQQ.......QQIQFMFNPMHQEPQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     108.72|      34|      42|     193|     232|       3
---------------------------------------------------------------------------
  197-  232 (58.52/39.97)	TLQLPLPP..........GGG..DRDNYLlqQQQLNTGAISRTGTSTS
  237-  282 (50.20/21.13)	TLNTYLFPcgasdsagtlGGGscDLDSNF..SQMVNGAGSSEAGSSFS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP25054 with Med12 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) FGVAEPNLGTNGGGAGANPYAAATLRRRSSQLGQFGKRRERERERELEEIEQQQR
2) MSSSNGNGNSAPSNEQQQQHQAGAAGPGAAATSGPEEVAGGGFSTRPATAPARTTDPSNNNNNNNNNNNNNNSTTTSSSTSYRVNLSNINNNSSNSNNNTSSRQASNNNHNESSTGLVVNTGATTATPAATATATATGNATATATTSSNNNHIYVNPHSYDSSTTGSASGSTAVMLPQPQPQPQPLPLPLPLSNPLTLQLPLPPGGGDRDNYLLQQQQLNTGAISRTGTS
3) TVASANAAFLERREMQLQQQQQQHLQHLQHQQQQQYLPQQQPQQQQQQIQFMFNPMHQEPQKKKKKKPPGPPAQARQQSSRTMDDPMMNRPRKGTPAKKDKKAAPENPYEKYHQITIQNQIKIKIRASQSTSKPLFSHLSHLASKPTAKRKL
313
1
370
367
230
521










Molecular Recognition Features






MoRF SequenceStartStop




1) FNPMHQEPQKKKKKKPP
2) KKAAPENPYEKYHQITIQNQIKIKIRASQ
3) LFSHLSHLASKPTAKRKL
422
470
504
438
498
521