<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24983

Description "Uncharacterized protein, isoform A"
SequenceMDGNAQNMFHGNHQGDPYYRYDAAAAAAAAAAANPRAMGPPGGYPPRHRAPHPLQQQPQYPSYQPTAENLYGLGAADHQAAMGLGVGVGVGVGVGVGGMGDLSGWGAAPTGVPGQAAAYPGAGLGAYGHPQAAPPAQQQRQSNASAYRQHMPAYGQQEQQKLAPYGAQQGMMAGYGSQQPPTPQQQQQVQAQQQAQQVQQQQAQQVQQQQQSQQQARLPQHYPQAPGQHPLYPGVGAPAVQAGQPPTPQGYAHSPYGSPMQHQPGRGAPQHVGYGHSGLDPNQASAYGQHVPGAAPPGHHQQQLGAHQQQQLQSQQQAQQVQQQAQQQQQQPHVSLMQQQLPGAGLPPPHMGMPPSYGSHHQQQQQQQQAQQQQQQAAPPYMSKQAAAQLNSSPQYRAPFPQLSPQMSPRPPTMSPHPQMSPRPVGVSPAKPPAPQQAQAQQQVVQQPQQPSQHSIQGMVGLPSPRPQPPSSGAVGGAVGSGSKVPPPVAAPVNTLQALEQMVMPTQAHGLPPMDYPSAYRSAVGPRMPASPQQQQQQQHHQQWGSQHMAAMQQQQQAAAAQQQQQQAQQQAAAQQQQQQQQAAPQQQQAAMLQAQQQHHQQQMSMYGQAMGQQQQQQPQAPQQVVPPVAAQQQPPQQQQQQQQQQQQQQHQQQQQQSLNDQLQHSINDIVGGGNSSGSTTSSQSSQQQQQQLQQSLPSMHHLIQPTLEATQQTQAAQQQQQQQQPQAALTSPHHQQLQHQSPIHQQQSPHHQQQHTLPSYNQSQQQFDPFANILGDNQPPAAQHVSSPAHVSSPIPAQMQQQQSQQQQQQQQQVPPAQQQQQAQVPQQQQQQPPQPTTPSHHLSSILNETANSNDSSTLAVAANDSNNSSSNSSTNSIVNNQPTSVHDSNSQSSINSSSNNQQQLLMDNTNSHGGNSESAQHVGVDVGLFDNNSMSSNSAAVAAVASNASAAAAALLDSNSQSSNAEFEKNQSESDGLGLGGVVASEPELPQDESSISKTQETSLSTELPAVQEEQLEKPSDDVEQTQISQPLGDMNTSLSEDAKSADEVGEDKSGAVPPMEPPPPQQQQMPPHYPMAPGYDGQNQGHMPPMMPPYGGAPGMYPPYPMLHQQEIAALQQQIQEIYCMPPGHEHQHQEKLMRLQERLNLLQQHEVNDQCAGGGPQCVLFQSMPPMYGSNPLHNQQMVESPQVSSTTGRGRGKGANKPRKPRAKKGEKVAAVGQDLMDISSNVVVGQANATQSIPTTQLPVSEDCVTQGAGDTSVVGMLEYSEGMGDLSQDVHSANELDTSTDGSGKKKKPRKPRIPKDPNKPPRDRTPKSKKPKDPNDPNSTDSPAPTSKKRASTSKKSKKQYGDDGAEQTGEGSEVEDNKPLVPKAESADGEAETTSAVVGVDGESPDYDDIPVSKIPRSANEEEKEPEAGDETVDSVPDSAGDAASTPSRRDRKRSTARSRRNANSEEGGSARRNRGSLSAKALKKRRNRGRIVPESDGEDDTLDRTPPPSPPPDSELDSNKRRSSRNTQRKKYIDDVMLRFSDDENSLLVASPVKKEKKSSANTANSNAGSDAEKTEPQSGAEGEAGGQEAGEDKSNIAMDESSQLEASSSTSAAAAAAAEKERQSSTDAANAAMSSKPNYVYINTGDEDSMVVQYVLAVRMGKRELIPEKPKEKTPEPKEEKEEEKPEEPEKSDDGEEKPKAEGEDGEAPEGESKPEESKLETESSGMEVDKEETPAENEKSEEDDTSSPKKEEEMEVDEPAEKEAKPEEQAEDDKTEAKSETNEEEKSSDVETAEEAKETESPEEKMEVDETPGSPKPKEESNSEEKSSEETEEEKKDEESAEKEEEKEESKEGDETEKKEEAEKENKPEPVYIDVEEYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQLNIFENIEEEPFNPDFTEVDRVLDMSVHTDENSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPMRCEWKSKKRPHPEQWKKLEKTPVYKAGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHGSVTSKQMIQDYEFYYKTETGKVLKEPIKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKAQHGEDPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQLSKKEIEDLLKKGAYGAVMDDDNAGDKFCEEDIDSILKRRTQVITMESEKGSTFSKASFAASGNRSDITIDDPDFWTKWAKKVDIDPDACERDETEDLVLSEPRRRTQIKRYGHEDVMEINSEDSSNENSDEEGGIGLRSRRRKEKRDRNREKKGHDEYIPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFGWGRWSELLELGQFKRGWRDIDIEDCARIILLYCLQVYKGDEKIKTFIWDLITPTEDGEVQKISRDHSGLHNLVPRGRNGGKSNKDSTGPGTASGSNSGNTTPAHKSSALDGSDKDGGISASAVAAAVSNPTSIHDPNHWSKKEKYDADAYLEGAYKKHLGRHANKVLLRVRMLYYIQHEVIGDLVQQIKDNTPISELPIRPPPTPDQVPSSWWNPICCDKSLLVGTYKHGCEMYRQMRADPNLCFVTHVGAGAGDDLAVTNLPINEDDANSKHDDGDEVDDDGTTTTKDSDSTKLTGGDNKDSLLDPERPSSSGLDEEESVAGSYPPTVAAVEDATTMWPSMQDLNTRLRRVITAYQRNYKKEELKQQQKAKLQALVSSTPPLSVPTTPTLQSMQMQLQSGTSGAGSSGSAAGQLDPSGRSLQALMQSQGASTSAAAAAAAAAAAAGGSAGQSQQGVGGAGGSVSVTGSGMPAMPSAADISLMLSILNTTDVNQLAQLDINKLAMYLVSMNNKMERQGKMELAAKERESQRLQLIPKKWNRREEYEFLRVLTGYGVDLHLSTPMGGNNASTLTPDWTKFKQMAHLERKSDETLTDYYKVFVTMCKRQAGLKLAESERGLEGIIEEIEKEHAKLILDRLELLSKLREVARNPQLEDRLKLCTMNADTPDWWEPGRHDKELITAVLKHGLYRSETFIFNDPNFSFGESEKRFIRELEAQIQRTIKLEAFNAEKAEKLAAAEKAAAAEKAAADKAVKNEVIDLDDELMTDESVIKKEGTPVKEEIKAEETADKKEAASPEPNTSEEEEPAKVESETEVKDDAVKAEDSEKETEPEAKAGEKEKSPAEADKDASETEESKASEEKMEVEEASIPAENGQEKAEITAESSPEKTPESEEKKSPEDKDKSVEVEEESAKMEVEEAPKADSEDKSPEKAESDAKESEEKTLPKPEEEKPEESKEESKEKSEDSDKEEKKPSAEAPETPEKASPATETEAAATAAKKPAGDQEILDLVAGPTDPDDDEVMKEKEKAVEEECKKQAAELKARFPDLEVIQPAAVKQQKLEKPKLEMCMIRWFKDFALERRIAHIVACVESGKWPVDSKYSAFASCKGVTDLSIALHESIPHLSSLERRSTTPDVITITTDQGVTKHLQASQMQQVASSAAASSGATGLSQSLSQSKPVSASTLPLLDANNINAAVAAAVAAAAAGGNATSLSSLLPGMSLSAATGASAGGVGGLNVPSAGSGLGKKRKRHIAIDVETERAKLHALLNSSTMAPKDWESEIANMEALTGGSSGRGRGSGSSSALSGMQPPPAHQHASLSRQSSGQFSKPAVPALKTPPPSMGAPMDLSSSLPKMNMTEMLKSASNAVAIDLSEVQDFSMPSKKSSVHAALSSAFPSMGSKSKLDDTLNKLMKKNNCTIEEPVIGKEKKRKKLDEIVLGLSAAKEQKTFPDPSLPSSKKPQIPPSVSVTPANLQSSSSQQQSNQKPFTITVTTVPGKSKGASSSGGSGAGGSSSASGGGAAGGSGLSALQNMAMGGLSSKDSLNALLAQTMATDPQTFLKQQQKMMQFLPPAQRKAYENMLAEMEQAMKLSSKYSANSPHDVKVNKWLSDMTSPLGDQLSIDYVGGGGAGSSSANSRRSNRQQSSSSQQSPSAAQLQKQQQQQQQQQQQQQQQSMAGPQNLTGEEPVPVINKQTGKRLGGNKAPQLKRLMQWLTENPNYEVDPKWLEQMQNPMSAPSPKPSSMDSYGSSAVKSHGGRPSSNSSNASSSSHTQQQQPNPAQSPAGNSGSSKKSSRQQSAAAAALDQAALQFGSLAGLNPNLLANLPGLGAFDPKNPLAAFDPKNPLLSMPFGGMPGMANIPGLGNLNNMNLFASLAGMGGLGNLAGMDTQSLAALMAAAGPSLGGLTGSSGAAGSSKNQGQSGGGSSNSSSSSASKKKQQQQQAQQQAQNEAAQLAAALSASSGGSGGGSSGGAGGKNSAPSASQLAAGFPFLFPNPSLLYPPMGLGGLNPYSLGSSGLGSAYDQLAQQYNLLNGATSSASNTSSTQSKSHQSQSKSSQSRNASAAANSAASLMNAMASMGGASTATTQSSSASGSGRGRQSSGRSQPQVTPTAADMAQLSSLLMPGADPLLLESLSRMSNMDLAQATRLMSSLGMPPLPGTSSSASGGGGGGSTSSSSASKRSSSQSANDQAKEHQKWLESLARGALPTDLAALQAFSQGKMPSTSSSNTATSSSSSSKSAKSSAAAAAAAAAAAQLPQIPGMTSDFSQAFLAEMAAQAMAAAGGSLPLSGPGSLASLAGLTGGSAGGSSGGASGGGSSSGNSSSSKRQREQDAFKQQMDYYTKTLGLGSGISLIPTSAGGSSSSSVAAAYAAALDAEHQQQQQQKSKRSRSEIHPTKEELAAAALAAGLPLNLGASMSSIEKSLRGGSSSSSSSTPAPMSAEQDKVTLTPLNASGSGSGSGSASGSGSSAAAAGLAANLPSQTTITIAPPISSGASTSSERSERSESRISLTITNAADAAKLPPPYEEADELIIQPILKKPAASGNPGSSHGGSVEDLDTAGNTSAANLSGSSSSSAAAAAAAAAAAAAEENRRSSNRLKRPRSGNEQGSVSAEGQPPEKRRELRSTRHTRSSADANSLNLSAGSESGAEERNE
Length5356
PositionKinase
OrganismDrosophila ananassae (Fruit fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Ephydroidea> Drosophilidae> Drosophila> Sophophora.
Aromaticity0.04
Grand average of hydropathy-0.830
Instability index63.54
Isoelectric point5.37
Molecular weight575546.84
Publications
PubMed=17994087

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
nucleosome-dependent ATPase activity	GO:0070615	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24983
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            11|    1088.10|     106|     107|     628|     733|       1
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  177-  223 (51.20/10.63)	...............................SQQ.PPtPQQQ....QQVQA.....QQQAQ...QVQ..................QQ...QAQQVQQ.......QQQ.....................................S..QQ.QARLPQ........HYP.............................
  224-  300 (91.18/25.85)	.QAPGQHPlYPGVGAP...........AVQ.AGQ.PP.TPQG....YAHSP.....YGSPM...QHQ..................PG...RGAP............QH...........VGYG.........HS..GLDPNQAS...AY.GQHVPG........AAPP.GHH........................
  301-  401 (112.24/33.87)	....QQQ.....LGAH................QQ.Q...QLQ....SQQQA.....QQVQQ...QAQ..................QQ...QQQPHVS.......LMQQQLP.........GAGlppphmgmpPSYGSHHQQQQQQ..QQaQQQQQQ........AAPPyMSK......QAA.AQLNSSPQYRAPfP
  402-  532 (104.31/30.85)	QLSPQMSP.RPPTMSP....hpqmsprPVGvSPA.KP.PAPQ....QAQAQ.....QQVVQ...QPQ..................QP...SQHSIQGmvglpspRPQPPSS......GAVGGA.........VGSGSKVPPPVAApvNT.LQALEQmvmptqahGLPP.MDYpsayrsAVG.PRMPA......S.P
  533-  611 (118.10/36.10)	QQQQQQQH.HQQWGSQ...........HMA.AMQ.Q...QQQaaaaQQQQQ.....QAQQQ...AAA..................QQ...QQQ...........QQQ..........A.......................APQQ..QQ.AAMLQ..........AQQ.QHH........Q.QQMSMYGQ...A.M
  612-  718 (185.54/61.77)	GQQQQQQP.QAPQQVV..........pPVA.AQQ.QP.PQQQ....QQQQQ.....QQQQQ...QHQ..................QQ...QQQSLND.......QLQHSIN......DIVGGG.........NSSGSTTSSQSSQ..QQ.QQQLQQ........SLPS.MHH......LIQ.PTLEATQQTQAA.Q
  719-  807 (112.18/33.85)	QQQQQQQP.QAALTSP..........hHQQ.LQH.QS.PIHQ....QQSPH.....HQQQHtlpSYN..................QS...QQQ.F.D.......PF..A........NIL..G.........D...............N.QPPAAQ........HVSS.PAH......VSS.PIPAQMQQQQSQ.Q
  808-  922 (111.09/33.43)	QQQQQQQ.....V.PP...........AQQ.QQQaQV.PQQQ....QQQPP.....QPTTP...SHHlssilnetansndsstlaVA...ANDSNNS.......SSNSSTN......SIVNNQ.........PTSVHDSNSQSSI..NS.SSNNQQ........QL............LMD.NTNSHGGNSESA.Q
  932- 1012 (46.32/ 8.77)	DNNSMSSN.SAAVAAV.....asnasaAAA.ALL.DS.NSQS....SNAEF.....EKNQ.................................SESD.......GL..GLG......GVVASE.........PELPQDESS.ISK..TQ.ETSLST........ELPA............................
 1014- 1084 (56.79/12.76)	.........................................Q....EEQLE.....KPSDD...VEQ..................TQ...ISQPLGD........MNTSLSedaksaDEV.GE.........DKSGAVPPMEPPP..PQ.QQQ............MPP..HY......PMA.PGYDG.........
 1085- 1202 (99.15/28.88)	.QNQGHMP...PMMPPyggapgmyppyPML.HQQ.EI.AALQ....QQIQEiycmpPGHEH...QHQ..................EKlmrLQERLNL.......LQQHEVN......DQCAGG.........GPQCVLFQSMPPM..YG.SNPLHN..............QQ......MVEsPQVSSTTGRGRG.K
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            10|     991.73|     121|     121|    4663|    4783|       2
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 4139- 4229 (62.05/15.07)	...............LGLSAAkeqktfpDP.SLP...........SSKKP......Q........IP...PSVSV.....T.PANLQSSSSQQQSNQK..P..................................ftitvttvpgkskgassSGG............SGaGGSSSA.................................................SGG..GAAGGS..GL...SA...
 4230- 4312 (45.18/ 8.73)	..LQ.NMAMggLSSKDSLNAL.......LAQTMAT...DP....QTFLKQQQKMMQF........LP...PAQRK.....AyENMLAEMEQAMKLSSK..YSAN.SPHDVKV.....NKWL..SDM..........................................................................................................................
 4314- 4412 (113.31/34.32)	.............SPLG.DQL.......SIDYVGG...GG.A..GSSSANSRRSNRQ........QS...SSSQQ.....S.PSAAQLQKQQQQQQQQ..QQQQ.QQQSMAG.....PQNL..TGEEPVPVINKQ.................TGK............RL.GG.........................................................NKAP.....QL...KRLMQ
 4413- 4512 (120.29/36.94)	WLTE.NPNY..EVDPKWLEQM......qNPMSAPSpkpSS.M..DS.YGSSAVKSH..........G...GRPSS.....N.SSNASSSSHTQQQQPN..PAQS.PAG..............................................N............S...GSSKK.................................................SSRQQSAAAAAldQA...ALQFG
 4513- 4599 (90.94/25.92)	SLAGlNPNL..LANLPGLGAF.......DP....K...NP.L...AAFDP...KNPL........LSmpfGGMPG.....M.ANIPGL.......GNL..NN.........M.....NLFA..SL....AGMG.....................................G..LGN.................................................LAGMDTQSLAA..LM...AAA..
 4600- 4691 (136.53/43.04)	.....GPS.........LGGL..........T.GS...SGaA..GSSKNQ..GQ............S...GGGSS.....N.SSSSSASKKKQQQQQA..QQQA.QNE..AA.....QLAA..AL.......SAS.................SGG............SG.GGSSGG.................................................AGGKNSAPSAS..QL...AAGFP
 4692- 4818 (177.50/58.43)	FLFP.NPSL..LYPPMGLGGL.......NPYSLGS...SG.L..GSAYDQLAQQYNL........LN...GATSS.....A.SNTSSTQSKSHQSQSK..SSQS.RNASAAA.....NSAA..SLMNAMASMGGA.................STA.........ttqSS.SASGSG.................................................RGRQSSGRSQP..QVtptAADMA
 4819- 4959 (111.80/33.75)	QL....SSL..LMP.....GA.......DPLLLES...LS.R..MSNMD.LAQATRLmsslgmppLP...GTSSS.....A.SGGGGGGSTSSSSASKrsSSQS.ANDQAKEhqkwlESLArgALPTDLAALQAF.................SQGkmpstsssntatSS.SSSSKS.................................................AKSSAAAAAAA..AA...AAQLP
 4972- 5063 (73.37/19.32)	FLAE.MAAQ..AMAAAG.GSL....plsGPGSLAS..lAG.LtgGSA....GGSSGG........AS...GGGSS.....S.GNSSSSKRQREQDAFK..QQMDyYTKTLGL.....GSGI..SLIP..TSAGGS.................................................................................................................
 5141- 5285 (60.74/14.57)	MSAE.QDKV..TLTPLNASGS.......GSGSGSA...SG.S..GSSAAAAGLAANL........PS...QTTITiappiS.SGASTSSERSERSESR..ISLTiTNAADAA................................................................klpppyeeadeliiqpilkkpaasgnpgsshggsvedldtagntsaanlSGSSSSSAAAA..AA...A....
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             8|     481.94|      64|      64|    3542|    3605|       3
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 1662- 1712 (48.49/18.87)	..........PEKPKE.....KTPEPKEE......KEEEKPeEPEKS..DDgEEKPKAEGEdGEAPEG.ESKPEE.............
 1713- 1768 (67.32/29.63)	....S.KLE.TESSGM.....EV..DK.E......ETPAEN.EKSEE..DD.TSSPKKEEE.MEVDEP.AEKEAK......PEEQAED
 1769- 1819 (43.61/16.07)	DKTEAKSET.NEEEKS.....SDVETAEE..................akET.ESPEEK....MEVDE........tpgspkPKEESNS
 3474- 3526 (59.65/25.24)	....KKEGT.PVKEEI.....KAEETADK......KEAASP.EPNTS..EE.EEPAKVESE.TEVKDD.AVKAED.............
 3527- 3582 (77.88/35.67)	....S.EKE.TEPEAK.....AG..EK.E......KSPAEA.DKDAS..ET.EESKASEEK.MEVEEA.SIPAEN......GQEKAEI
 3583- 3636 (63.19/27.27)	TAESSPEKT.PESEEK.....KSPEDKDK.................S.vEV.EEESAK....MEVEEApKADSED.....kSPEKAES
 3637- 3692 (69.52/30.89)	DAKESEEKTlPKPEEE.....KPEESKEE...skeKS.......EDS..DK.EEKKPSAEA.PETPEK.ASPA............TET
 3693- 3763 (52.27/21.03)	EAAATAAKK.PAGDQEildlvAGPTDPDDdevmkeKEKAVE.EECKK..QA.AELKARFPD.LEVIQ....PAAV......KQQKLE.
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.87|      25|      25|    1298|    1322|       4
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 1298- 1322 (48.74/23.42)	KKPRKPRIPKDPNKPPRDRTP...KSKK
 1324- 1351 (28.14/ 9.73)	KDPNDPNSTDSPAPTSKKRAStskKSKK
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     238.99|      44|      59|    4016|    4059|       5
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 3827- 3856 (30.54/10.34)	...S....LERRS......TTP......................DV.....ITITTDQ...G.............................VTKHLQAS..QM....Q..
 3857- 3921 (31.74/11.15)	QVAS....SAAASSGatGLSQSlsqskpvsastlplldanninaAV.....AAAVAAAAAGG.............................NATSLSSLLPGM.......
 3922- 3989 (34.57/13.05)	...S....LS.AATG..A.SAG......................GV.....GGLNVPSAGSGlgkkrkrhiaidveteraklhallnsstmAPKDWESEIANM....EAL
 3990- 4014 (26.93/ 7.91)	TGGS.....SGRGRG..SGSSS......................AL.....SGMQ.PPPA..................................................
 4017- 4059 (73.26/39.07)	.HAS....LSRQSSG..QFSKP......................AV.....PALKTPPPSMG.............................APMDLSSSLPKM....NMT
 4063- 4119 (41.96/18.02)	KSASnavaIDLSEVQ..DFSMP......................SKkssvhAALSSAFPSMG.............................SKSKLDDTLNKLmkknNCT
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     239.21|      58|      59|    3071|    3128|       6
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 2986- 3020 (36.57/11.39)	.......................TT..TTKDSDSTKL....TGGDNKDSL...LDPERPSSS..GLdeE
 3021- 3061 (30.82/ 8.30)	E.....SVAGSYPP.TVaavedATTmwPSMQDLNTRLRRVITAYQRN......................
 3071- 3128 (95.81/43.23)	QKAKLQALVSSTPPLSV.....PTT..PTLQSMQMQLQSGTSGAGSSGSAAGQLDPSGRSLQ..AL..M
 3131- 3185 (76.01/32.59)	QGASTSAAAAAAAAAAA.....AGG..SAGQS.....QQGVGGAGGSVSVTGSGMPAMPSAAdiSL..M
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     124.79|      32|      34|    1362|    1393|       8
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 1362- 1389 (40.03/14.54)	.....GEGSEVEDNKPL..VPK.AESADGEAE...TTSA
 1390- 1424 (27.76/ 7.71)	VVGVdGESPDY.DDIPVskIPRsANEEEKEPE...AGDE
 1559- 1584 (29.17/ 8.50)	..NS.NAGSDAEKTEP.......QSGAEGEAG...GQEA
 1590- 1623 (27.84/ 7.76)	NIAM.DESSQLEASSS...TSA.AAAAAAEKErqsSTDA
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.30|      19|      24|    2015|    2038|       9
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 1995- 2013 (34.78/21.52)	WKSKK..RPHP.E..QWKKLEKTP
 2015- 2038 (24.52/32.59)	YKAGNslRPYQlEglNWLKFSWYN
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.47|      25|      25|      95|     119|      11
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   95-  119 (46.88/20.68)	GVGGMGDLSGWGAAPTGVPGQAAAY
  123-  147 (43.58/18.60)	GLGAYGHPQAAPPAQQQRQSNASAY
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      95.83|      29|      34|    1493|    1521|      12
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 1430- 1470 (23.27/ 6.04)	..PDSAGDAastpsrrdRKRstaRSRRNA...nseEGGSARRNRGS
 1487- 1503 (30.32/10.02)	PESDGE.............................DDTLDRTPPPS
 1504- 1535 (42.25/16.75)	PPPDSELDS........NKR...RSSRNTqrkkyiDDVMLRF...S
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     126.54|      35|      63|    2514|    2549|      13
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 2514- 2548 (60.44/41.13)	DLLKKGAYGA.......VMD...DDNAGDKF..........CEED..IDSIL...KRRTQ
 2558- 2614 (36.37/18.03)	STFSKASFAAsgnrsdiTID...DPDFWTKWakkvdidpdaCERDetEDLVLsepRRRTQ
 2615- 2649 (29.73/16.80)	..IKRYGHED.......VMEinsEDSSNENS..........DEEG.gIGLRS...RRR..
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.78|      13|      64|    3346|    3367|      14
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 3346- 3363 (13.63/27.03)	LREvarnPQLEDRlKLCT
 3371- 3383 (27.15/10.60)	WWE....PGRHDK.ELIT
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.45|      27|      29|    5295|    5323|      15
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 5295- 5323 (43.29/29.79)	RRSSNRlkRPRSGNEQGS..VSAEGQPP.EKR
 5325- 5354 (35.16/17.28)	ELRSTR..HTRSSADANSlnLSAGSESGaEER
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.40|      23|      29|    2769|    2795|      16
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 2769- 2795 (33.64/29.60)	SGlhNLVPRGRNGG..KSNKDstGPGTAS
 2799- 2823 (36.77/18.80)	SG..NTTPAHKSSAldGSDKD..GGISAS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     113.76|      38|      62|    2122|    2183|      17
---------------------------------------------------------------------------
 1869- 1918 (48.79/30.08)	IDvEEYFVKYRNfsylhCEwrteeeLLKGDRRVAAKIRRFQQKQSQQLNI
 2157- 2194 (64.98/67.25)	ID.EAHRLKNRN.....CK......LLEGLRQLNLEHRVLLSGTPLQNNI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     104.85|      25|      62|    2218|    2242|      18
---------------------------------------------------------------------------
 2218- 2242 (39.75/25.26)	EFGSLRTEEE......VNKLQALLKPMM.LRR
 2248- 2277 (29.68/16.62)	EK.SLAPKEEtiieveLTNIQKKYYRGI.LEQ
 2278- 2303 (35.42/21.55)	NFSFLKKGTT......SANIPNLMNTMMeLRK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.88|      21|      64|    2892|    2912|      19
---------------------------------------------------------------------------
 2892- 2912 (39.63/24.13)	DNTPISELPIRPP.PTPDQVPS
 2962- 2983 (29.26/15.20)	TNLPINEDDANSKhDDGDEVDD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      87.07|      18|      18|    2686|    2703|      21
---------------------------------------------------------------------------
 2686- 2703 (36.44/27.14)	WAK...SECFKVEKG...LLSFGW
 2706- 2719 (27.02/17.73)	W.....SE.L.LELG...QFKRGW
 2727- 2750 (23.61/14.32)	CARiilLYCLQVYKGdekIKTFIW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     121.40|      40|     111|    2311|    2372|      24
---------------------------------------------------------------------------
 2112- 2156 (62.37/38.20)	YEFyyKTETGkvlKEPIKF..NVLITTFEMIVTDYM..DLKAFNWRLCV
 2320- 2363 (59.03/72.60)	YDF..KAQHG...EDPESYykNLILSAGKMVLIDKLlpKLKANGHRVLI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.44|      13|      25|    1953|    1967|      30
---------------------------------------------------------------------------
 1953- 1967 (17.90/23.17)	KHYLvKWKSLPYEdC
 1981- 1993 (25.54/18.10)	EQYL.RFNKIPMR.C
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.98|      12|      18|    3273|    3284|      32
---------------------------------------------------------------------------
 3273- 3284 (23.95/15.33)	TLTPDWTKFKQM
 3294- 3305 (22.03/13.48)	TLTDYYKVFVTM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      32.29|      10|      23|    3427|    3436|      36
---------------------------------------------------------------------------
 3427- 3436 (16.64/13.03)	EAFNAEKAEK
 3447- 3456 (15.66/11.56)	EKAAADKAVK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24983 with Med12 domain of Kingdom Metazoa
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