<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24975

Description Uncharacterized protein
SequenceMDPETQVIDTVNEFLKVDSIDEAFVSVIVFKANGEEKRATNFTNDLVTAFGNVPQENREQVLKQYILRTAGASGYHMKVLMDALVKLVDAHVITARMLCDKVLMCEKLDYEHKTFWIESFRLIKRVIMQVDYKGVREIMKVCRDKAQWFPLNVNVTYMPQLLAVEDILRYIFDRNNCLLPAYFIANEIMRPFPYHWKLNRLMTDFVEEFRTTAQMVSIIGHPNMLPIVEHFGYADHMMNSWRLDHNTLKFNFKGILPYEPELLEEQKPLLRYVLEQPYSREMVSQMLNLQKHQKQRYNALEEQLVNLIVQAMEMTEANDATAGSGFNASDEQITPYEWVWLHLSSQLIYFVLFQFVSFMHIVLALHEKLSKLELRKGRDQLMWILLQFISGSIQKNPITNFLPVFRLFDLLYPELEPLKLPDINKSSMVRHMAPICVWIHLMKKARVENMNITRPLPIALKNHYDFLQHLVTPNTMMNMSLGNDFRIILICNAYSTNQEYFGRPMGLLLDALNGTSKSPNGAQIPAVTFSVTVLDSLTVHSKMSLIHSFVTQMLKQAQSKGQVPAAALLETYARLLVYTEIESLGIKGFLSQLMPTVFKNQAWAMLHTLMEMFSYRLHHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTALRLITSIGSAEFQPQFSRYFNDKSPGAVASNESEELNRVLILTLARSMHVHGGGDEMQSWCKDFLSNIMQHTPHSWPMQSLACFPPALNEYFTQNNQPAENKQQLKKSVEEEYRTWTSMTNENDIIAHFLRPTTNPLFLCLLFKIIWETENISPVAYKILEGISARALSTHLRKFCDYLVAEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLLLKASELRNRVQEFCKDNNPDHWKQSNWQDKHLSFHQKYPEKFALDESASQIPLPVYFSNVCLRFLPVLDVVVHRFIELTIPNVHQILGFILDHLSILYKFHDRPITYLYNTLHYYERILRDRPSLKKKLVSAITSAFSEIRPPNWSVSEPYKVFLQNQDLLWTPELSYYMSLIRRLADTISGKNVFYSTDWRFNEFPNAPTHALYVTCVELLGLPVAPALVANNIIDVIVSGYAVIPQKEIHGYINAVGIVLAALPEPYWSGIYDRLQDMLNTPNMLNWTYRFNAFELFNFKTVREAMLEKSYAVVLAVAHSVFHHMGAFKLAAMTRYLKEKLKPCVRTEQQLLYLCHVFGPFLQRIELEKPNAVAGIAVLLYEILEIVDKQHGPKPLVYMDQICDFLYHIKYIHVGNIIKNESEAIIKRLRPLLQMRLRFITHLNLEDIHTEKVTESNPPAIANQAQSPQQPQHQQQMQQHQVNVPQTTSVPLGSGGNPQQQLNQQQHQQMYMQHMQQQQQHLQNMRHN
Length1414
PositionTail
OrganismDrosophila ananassae (Fruit fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Ephydroidea> Drosophilidae> Drosophila> Sophophora.
Aromaticity0.10
Grand average of hydropathy-0.139
Instability index41.30
Isoelectric point7.23
Molecular weight163944.22
Publications
PubMed=17994087

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24975
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.56|      26|     100|     149|     174|       1
---------------------------------------------------------------------------
  149-  174 (45.87/33.14)	FPLNVNVTYMPQLLAVED.ILRYIFDR
  250-  276 (40.69/28.40)	FNFKGILPYEPELLEEQKpLLRYVLEQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.87|      15|      16|    1080|    1094|       2
---------------------------------------------------------------------------
 1080- 1094 (30.96/19.42)	FYSTDWRFNEFPNAP
 1098- 1112 (26.91/15.89)	LYVTCVELLGLPVAP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.61|      12|      20|     712|     731|       4
---------------------------------------------------------------------------
  712-  730 (19.03/27.10)	QSWCKDflsNImqhtPHSW
  905-  916 (28.58/10.89)	QEFCKD...NN....PDHW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.68|      14|      20|     202|     215|       5
---------------------------------------------------------------------------
  202-  215 (25.26/14.35)	MTDFVEEFRTTAQM
  224-  237 (27.42/16.16)	MLPIVEHFGYADHM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.41|      13|      20|     743|     755|       6
---------------------------------------------------------------------------
  743-  755 (24.45/15.95)	NEYFTQNNQPAEN
  765-  777 (24.95/16.44)	EEYRTWTSMTNEN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.50|      18|      21|      91|     110|      10
---------------------------------------------------------------------------
   91-  110 (27.88/30.56)	HV...ITARMLCDKVLMceKLDY
  112-  132 (26.61/19.33)	HKtfwIESFRLIKRVIM..QVDY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.00|      15|      25|     595|     609|      11
---------------------------------------------------------------------------
  595-  609 (28.99/17.98)	PTVFKNQAWAMLHTL
  621-  635 (27.01/16.23)	PTHYRVQLLSLLHSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     139.28|      34|      37|    1333|    1367|      12
---------------------------------------------------------------------------
 1298- 1325 (41.44/19.83)	IHVGNI..IKNES.EAIIKRLR.PLL.........QMRLRF
 1334- 1367 (63.72/41.30)	IHTEKV..TESNP.PAIANQAQSPQQPQHQ....QQMQQHQ
 1369- 1405 (34.12/17.35)	....NVpqTTSVPlGSGGNPQQQLNQQQHQqmymQHMQQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.08|      14|     765|     179|     193|      13
---------------------------------------------------------------------------
  179-  193 (24.59/20.46)	LPAYFiANEIMRPFP
  947-  960 (28.49/18.47)	LPVYF.SNVCLRFLP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.00|      13|      16|    1222|    1234|      16
---------------------------------------------------------------------------
 1222- 1234 (23.63/15.50)	YLKEKLKPCV.RTE
 1239- 1252 (21.36/13.26)	YLCHVFGPFLqRIE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24975 with Med23 domain of Kingdom Metazoa
Unable to open file!