<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24925

Description "Podospora anserina S mat genomic DNA chromosome 2, supercontig 3"
SequenceMNPARNLRAEYQSKVRVTDKYKVIGFISSGTYGRVYKAHGRHGQPGEFAIKKFKPDKEGEQVTYTGISQSAVREMALCSELNHANVIKLIEIILEDKCIFMVFEYAEHDLLQIIHHHTQQPRHPIPPNTIKSIMFQLLNGCQYLHTNWVLHRDLKPANIMVTSSGEVKIGDLGLARLFYKPLHSLFSGDKVVVTIWYRAPELLLGSRHYTPAIDMWAVGCIFAELLSLRPIFKGEEAKMDSKKTVPFQRNQMQKIVDVMGLPTKERWPLLTSMPEYSQLPSLSPPLGGGGGGGHAGHHGHHGYGSHHHHQSHHGRGGNNAAASVSHLEKWYYGTINQQISSTAQANGASSLSVLGAQGYNLLAGLLEYDPEKRLTAANALQHPFFAESPDPINANCFAGVKMEYPHRRVSQDDNDIRTGSLPGTKRSGLPDDSLRPGKRVKEN
Length443
PositionKinase
OrganismPodospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) (Pleurage anserina)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Sordariomycetidae> Sordariales> Chaetomiaceae> Podospora> Podospora anserina.
Aromaticity0.08
Grand average of hydropathy-0.444
Instability index37.19
Isoelectric point9.12
Molecular weight49309.62
Publications
PubMed=18460219
PubMed=24558260

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24925
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.58|      23|      26|     303|     327|       1
---------------------------------------------------------------------------
  303-  327 (39.37/27.76)	YGSHHHHQSHHGRGgnNAAASVSHL
  332-  354 (38.20/20.58)	YGTINQQISSTAQA..NGASSLSVL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.58|      13|      33|     360|     373|       2
---------------------------------------------------------------------------
  360-  373 (19.69/14.81)	NLLAGL.LEYdPEKR
  395-  408 (23.89/13.04)	NCFAGVkMEY.PHRR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.16|      11|      27|     171|     181|       5
---------------------------------------------------------------------------
  171-  181 (19.93/10.10)	DLGLARLFYKP
  201-  211 (20.23/10.34)	ELLLGSRHYTP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24925 with CDK8 domain of Kingdom Fungi
Unable to open file!