<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24912

Description Uncharacterized protein
SequenceMSSEILFVIEGTAINGAYINDMKSNYIIPTLEYFSQSTVGDCFDGYATDKNGNQYGVVTYKTAQSLPGVCCTTFGPYNSAHKVLGAIDRLELSGGKSESNANLAEGLATALVCFDDFDEMRENTGQKVHKYCILIAASSPYSMYVTECYAYENKNVEQLVALFQEKNINLSIISPRKIPILFKLFEKSGGDLSSSSIKNYCKDPRHLVLLKGFSLKERPVSPPVNNANNASANHNQVGSMPSPNPNQQQQQQQQQQQVQQQQQVNNQQNVMDGVPGQQQQQQMMGAGMEKNPPKMVHFAVWPLLFLPLAAAAFNDVFDEELLIKPLPDGFVYSYFQFTTRWQLAANDSLLHTHLVSRSLAELVHHYDVSELHLSFTNGIWRYENWGFPVVDAGPGAEVWAWFANARDDGEVDGRWKQLCGTLSGLFCASLSFVDGTNTFRPEYSLRPQTHRFGEELRVRYAALPREIVCTENLTPWKKLLPCKLREGFASLLTPDHVYSGNYHSLALHVRKLCEDAECGRSSWRGGRVSAVQTALLRRCRASCCRMRAARAQQQLY
Length556
PositionUnknown
OrganismCulex quinquefasciatus (Southern house mosquito) (Culex pungens)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Culicinae> Culicini> Culex> Culex.
Aromaticity0.10
Grand average of hydropathy-0.354
Instability index45.44
Isoelectric point6.70
Molecular weight62350.86
Publications









Function






Annotated function


GO - Cellular Component
GPI-anchor transamidase complex	GO:0042765	IEA:InterPro

GO - Biological Function
GO - Biological Process
attachment of GPI anchor to protein	GO:0016255	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24912
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     170.83|      45|      58|     373|     418|       1
---------------------------------------------------------------------------
  327-  343 (20.49/ 6.73)	.......................PDGFVYSYF..........QFTTRW.QL
  373-  418 (83.53/54.76)	LSFTNGI..WRYEnWGFPVVDAGPGAEVWAWFAN.ARD..DGEVDGRWKQL
  430-  479 (66.81/38.89)	LSFVDGTntFRPE.YSLRPQTHRFGEELRVRYAAlPREivCTENLTPWKKL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.85|      16|      28|     235|     252|       2
---------------------------------------------------------------------------
  221-  236 (24.94/ 6.41)	SPPVNNANNASANHNQ
  239-  254 (32.91/16.16)	SMPSPNPNQQQQQQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      32.92|      10|      26|     175|     185|       6
---------------------------------------------------------------------------
  175-  185 (14.31/11.88)	PRKIpILFKLF
  204-  213 (18.61/ 9.64)	PRHL.VLLKGF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24912 with Med25 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) VSPPVNNANNASANHNQVGSMPSPNPNQQQQQQQQQQQVQQQQQVNNQQNVMDGVPGQQQQQQMMGAGME
220
289










Molecular Recognition Features






MoRF SequenceStartStop




NANANA