<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24911

Description Uncharacterized protein
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
Length1039
PositionUnknown
OrganismCulex quinquefasciatus (Southern house mosquito) (Culex pungens)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Culicinae> Culicini> Culex> Culex.
Aromaticity0.04
Grand average of hydropathy-1.250
Instability index72.19
Isoelectric point8.78
Molecular weight116476.80
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24911
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     546.57|      42|      66|     302|     343|       1
---------------------------------------------------------------------------
  243-  277 (70.31/ 7.51)	....P..NPNQQQQQQ...QQQQ...Q..QQ..VQQ..QQ.QVNNQQNV.................M..........DG.VP
  302-  343 (99.62/15.52)	G...PMGNPQQQQQQQ...VQQQ...Q..QQAVLQQQLQQ.QQQQQQCR.................M..........NF.NP
  353-  406 (69.91/ 7.40)	G..fPNQMPNQQQQGG...VGGM...N..YQQQLQQQQQQ.QQQQQQMR.................WmappqaqpgrNFmQP
  592-  638 (70.99/ 7.70)	Q...GQGQPNQQQQQQ...PQQQ...QmgGGGVQGQQQQQ.QTPNQQPR..............eriW..........NG.ML
  669-  710 (97.04/14.81)	G...PMGNPQQQQQQQ...QQVQ...Q..QQAVLQQQLQQ.QQQQQQCR.................M..........NF.NP
  720-  779 (73.48/ 8.38)	G..fPNQMPNQQQQGG...VGGM...N..YQQQLQQQQQQ.QQQQQQMRwmappqaqpgrnfmqpgM..........NG.NP
  847-  896 (65.22/ 6.12)	GqgqP..NPQQQQQQQnmmVQQQnmaQ..QQQMLQQQQQNmQNQNMQNP.................M..........GV.PG
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     393.51|      54|      56|     478|     532|       2
---------------------------------------------------------------------------
  460-  518 (106.74/20.08)	NQMNNPRMQ.M..QfvnnclqGQGQPNPQQQQQQNMMVQQQNMAQQQQML..QQQQQNMQNQNM
  520-  577 (112.84/20.05)	NPMGVPGGQ.MGGQ...migaNQQQQQLQQQQQAAAMNNQQQMGGAGGAN..PQQQQQLQQQQM
  897-  949 (84.50/11.39)	.......GQ.MGGQ...migaNQQQQQLQQQQQAAVMNSQQQMGGAGGANpqQQQQQQLQQQQM
  950-  996 (89.43/14.11)	VP.GGPGGQqVPGQ.......GQGQGQPQQQQPQ.....QQQMGGAVQG...QQQQQQTPNQQ.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     243.73|      59|     366|     392|     477|       3
---------------------------------------------------------------------------
  392-  459 (120.32/37.54)	MAPPQAQPGR....nfmqpgmNGNPQQnpQQQQQQQQQQNQMLGNNGGQQQSNSVLISQLTTPPHGMNAQQM
  759-  828 (123.41/28.55)	MAPPQAQPGRnfmqpgmngnpQQNPQQ..QQQQQQQQQQNQMLGNNGGQQQSNSVLISQLTTPPHGMNAQQM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.85|      20|     366|     639|     658|       4
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  639-  658 (44.93/36.33)	EWIEKPNKNEATKVSRQVPC
 1007- 1026 (44.93/36.33)	EWIEKPNKNEATKVSRQVPC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.26|      10|     366|     292|     301|       6
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  292-  301 (21.13/11.90)	NNQAALAGMR
  659-  668 (21.13/11.90)	NNQAALAGMR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24911 with Med25 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) QLQQQQQQQQCRMNFNPNHMGNPNQMGFPNQMPNQQQQGGVGGMNYQQQLQQQQQQQQQQQQMRWMAPPQAQPGRNFMQPGMNGNPQQNPQQQQQQQQQQNQMLGNNGGQQQSNSVLISQLTTPPHGMNAQQMNQMNNPRMQMQFVNNCLQGQGQPNPQQQQQQNMMVQQQNMAQQQQMLQQQQQNMQNQNMQNPMGVPGGQMGGQMIGANQQQQQLQQQQQAAAMNNQQQMGGAGGANPQQQQQLQQQQMVPGGPGGQQVPGQGQGQGQPNQQQQQQPQQQQMGGGGVQGQQQQQQTPNQQPRERIWNGMLEWIEKPNKNEATKVSRQVPCNNQAALAGMRGPMGNPQQQQQQQQQVQQQQAVLQ
2) QQQQQQCRMNFNPNHMGNPNQMGFPNQMPNQQQQGGVGGMNYQQQLQQQQQQQQQQQQMRWMAPPQAQPGRNFMQPGMNGNPQQNPQQQQQQQQQQQQNQMLGNNGGQQQSNSVLISQLTTPPHGMNAQQMNQMNNPRMQMQFVNNCLQGQGQPNPQQQQQQQNMMVQQQNMAQQQQMLQQQQQNMQNQNMQNPMGVPGGQMGGQMIGANQQQQQLQQQQQAAVMNSQQQMGGAGGANPQQQQQQQLQQQQMVPGGPGGQQVPGQGQGQGQPQQQQPQQQQMGGAVQGQQQQQQTPNQQPRERIWNGMLEWIEKPNKNEATKVSRQVPCMVTANVKDGEPEM
3) RPVSPPVNNANNAGANHNQVGSMPSPNPNQQQQQQQQQQQQQVQQQQQVNNQQNVMDGVPGQQQQQQMMGAGMGNNQAALAGMRGPMGNPQQQQQQQVQQQQQQAVLQ
327
698
218
692
1039
325










Molecular Recognition Features






MoRF SequenceStartStop




1) RIWNGMLEWI
1000
1009