<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24896

Description Uncharacterized protein
SequenceMAFRPSNDFFLNGTRLRSRLPVTVPLRFLFTLRLRPHLVVLPRLAVNNLLYLLPAVVQTPTIYRVLHTKGVNPLELLEQLNLPMIASPPIFHRPATVRASVIKTKRSKSASFKEAFQQIEDFIANPEYSTQLLTGELDNRPETDVEFNKLRETEQHDDVECAGKGLTTRTDAFHKNCSTRLWDATYTIQGPLTWRRFHRLPDEAQANANLNPYQTDSVPVRQYWDKLLHEPYSNARDNAQKSSARKKSLDLYIFSPVRRNVPASHLLNHPVAVARLFTPGINIQTSNLKFLPRARHHGLRYRKDPAQLRPLGCGVEPHRQQVPQAQEAGAEDADTPSDVIEFTDGTNSCVSDPQEAKDLVFGNCCVMSANLVGKGFVQMTGGDPEKSQDIAKQIICKEAGTWMHNSKNQAKEGTLIILVAKQFGSKSAISRNTFYLGDMVNVTKMNLVQTIHGVTLAGIAKGLISTDLERETLVSSSAITSMAPESIPPTQQQIVREQRKRTSKIRKALKIRPTMEH
Length517
PositionMiddle
OrganismCulex quinquefasciatus (Southern house mosquito) (Culex pungens)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Culicinae> Culicini> Culex> Culex.
Aromaticity0.07
Grand average of hydropathy-0.428
Instability index43.22
Isoelectric point9.56
Molecular weight58076.81
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24896
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     102.81|      18|      35|      27|      44|       1
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   10-   26 (22.13/ 8.91)	.FLNGTRLRSRLPVTVPL
   27-   44 (31.43/15.08)	RFLFTLRLRPHLVVLPRL
   45-   62 (24.90/10.74)	AVNNLLYLLPAVVQTPTI
   64-   80 (24.36/10.39)	RVLHTKGVNP.LELLEQL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.86|      18|      36|     219|     236|       2
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  219-  236 (35.98/25.85)	PVRQY..WDKLLHEPYSNAR
  256-  275 (27.88/18.36)	PVRRNvpASHLLNHPVAVAR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.73|      14|      29|     352|     365|       3
---------------------------------------------------------------------------
  352-  365 (26.91/16.54)	DPQEAKDLVFGNCC
  383-  396 (24.82/14.77)	DPEKSQDIAKQIIC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.35|      16|      29|     292|     307|       5
---------------------------------------------------------------------------
  292-  307 (29.94/21.58)	PRARHHGLRYRKDPAQ
  323-  338 (27.42/19.12)	PQAQEAGAEDADTPSD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24896 with Med13 domain of Kingdom Metazoa
Unable to open file!