<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24789
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAETLPSMSDAVRKRTIADWVVKTKKQVVKLYAVVKWSRDAETVQKCMNIIGFILLQNREFGFATQGLLDIKEELDPNRVRNHDLLTSLDVLTTGSYLRLPSCIKKLVVPPTPLNDEQVKKTLVDMESAILYRLRMTEIIPVEMSRYKIADGRVHFTVPKLFEASLCLQGPTSSAGWFFVHVEFLINVGGDLSGLQEFPRIPPGIIKRHITDEADFRLSYYIFQDMDPERPKLPENVVDTPLIRLYNFLRNIHLSTVFAHSTERVSVAQAGRMRTLGWGEYLSVNMSADRKTLKVSYWLRPPPPANQPRPRTKQPPHGGSLTIAIETVDPHSSRTPKEHVMARLQQELKLGNAKPSDTIEKMRLRVTWEPSQGVLGVDVAQSEVNFHPSELEIDADNLDFESLLLKVIDKHVTAILKALTFKLQHDPNGEFSAPGVVTAEKDTLSVRLCADEVVTINIDSRTGRINLRDTNGLVVAGRAPRFYFVALTINQAPELLIDRLKQKAQILGLQYYKSRNFTSQGLDRLGKCRGMLFILVSKSQQAQALHIRAQVEHYLVLVVKTKGFSYALITASANPSDPLAPLKVDDVAYLDYDRLPFANSETGAPIAPATPVNIYEWIANDFGASTGFDLTTQMLKELFRYCCARVAYMTVEKQLKVRGIPFKRVAPTSGIPLSPELAKMQSPLARSVPALCVQATHILSGAPAAEAAMPNIRVIPINWWSSHENVQVITCVKLKYVQQPFGKRAGGGSSVIRPSKRIIYDTKEAVVSFLSENVDTCVDEFLEEWARVSKMVVIAREIAKMSKERGWKDIKLLSFDLQTVEFAYAPGYSVSITCENQLSIIGGKFDLRFTRHGDDDQQDTFNPHDDAEPYLSNILHHGHNRLASALESLVRILTDTLPIAVELESIRKESMESGFFVDTFAKASGWYRILYPDLKHALDFRVLRDHRVAIVDASHPLHKPARPAEPPTPPPSDSMNTDPPEPSSSTATVSASTSTSTSLSASSSQSGNAKGSYSPGLQPLPGFAEIVKEAVAATLKEQKGIKYLVNIDVGVVCETSIARLIARKLHEKVAEKLKAS |
Length | 1076 |
Position | Tail |
Organism | Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) (Inky cap fungus) (Hormographiella aspergillata) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Agaricomycetes>
Agaricomycetidae> Agaricales> Psathyrellaceae> Coprinopsis.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.185 |
Instability index | 41.94 |
Isoelectric point | 8.67 |
Molecular weight | 119783.36 |
Publications | PubMed=20547848
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Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
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GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP24789
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 206.41| 67| 149| 590| 659| 1
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590- 659 (106.71/84.23) LDYDRLPFANSETGAP..IAPATPVnIY...EWIANdFgASTGFDL.TTQMLKELFRYCCARVAYMTVEKQLKVRG
734- 806 (99.70/65.02) LKYVQQPFGKRAGGGSsvIRPSKRI.IYdtkEAVVS.F.LSENVDTcVDEFLEEWARVSKMVVIAREIAKMSKERG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 257.13| 79| 99| 165| 250| 2
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165- 250 (131.27/99.46) SLCLQGPTSSAGWffvhVEFL.INVGGDLSGLQ..EFPRIPPGIIK.RHITDEADFRLSYYI.FQDMDPERPKLPENVVdtpLIRLYNFLR
266- 349 (125.86/78.15) SVAQAGRMRTLGW....GEYLsVNMSADRKTLKvsYWLRPPPPANQpRPRTKQPPHGGSLTIaIETVDPHSSRTPKEHV...MARLQQELK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 258.81| 74| 784| 47| 128| 3
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47- 122 (118.10/79.31) CMNIIGfILLQNREFGFATQGLLDIKEELDPNRVRNHD.....LLtSLDVLTTGSYLRLPSCIKKLV.....VPPTPLNDEQVKKT
834- 909 (98.54/56.62) CENQLS.IIGGKFDLRFTRHGDDDQQDTFNP.....HDdaepyLS...NILHHG.HNRLASALESLVriltdTLPIAVELESIRKE
933- 969 (42.17/24.57) .......................DLKHALDFRVLRDH.........RVAIVDASHPLHKPA...RPA.....EPPTP.........
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