Description | Uncharacterized protein |
Sequence | MDGSTWLNNSLNMEERAKNVNDLLQVLMDINDINGGNNDTAEKMKIHAKNFEAALFAKSSSKKEYMDNMREKVTAMRNTLNSRKKEVVSKSSGNNNPSNTSTNTNTNVNVNANSNTSNNNTSSAANSDKMGNFPLNMNSQMFLNQQAQLRQQAAQQLRTQQQQQRPQLTPQQQQIINQMKVAPIPRELLSRIPNIPPGVNTWQQITELAQQKVLSQQDMHIAKEIYKVHQQLLYKSKLQQQQQQQAQAQAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQAQAQAQAQQQQQKGNQAQNPGNRPTEVPNVLGQINQIFTPEEQRALLQEAMEACKNFRKTQYGNNMTDANRQNFIRKYINQKALRKIQSMRMAQMGNKNANSNTNNTNINTNTNANNNNNNGGNNNNNNNNINNNNTNINRNNNPPLINNNTVNNNGNQITTNPQANVNAQKNITGLQNNNQFIPNQNNNNSNQFNANVQNNNQQQQQQQQQRNQQSQQRQNLLQALAPTQQDIEVVKKVSAEAARIPLRLSDLTNTLSVQEREEIKRKLQLNQQLFAQVSNYAPQVYIFTKSENFLKEVLQLRIFVKEILEKCSKGIYVVKLDTVDKLIMKYQKYWESMKIQLLRRQQLIQRQQQAAGNNMPQNQQQSQTQPQQQQPQQQQQPPQQQPQPQQQQQLPRQQISTGNNLSQQQQRVQGSLQHIQQQMQQKQRQMAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQVQAQAQAQAQAQAQAQPQVQPQTQGPNHASQPQIPNSDSSKAQGYNQMMNNNSVDQNAATANVTANRGIVGNIDLTASQDISKMSPNTAVSPGKKETKRPISGKVKKAKKLSPASTTSVQNTPIPISPSVVKSTAGIQGTPSPLTTTDISTSRSSLNVSQTSSGENPFNEEEALLKNLNARKAEIISRYKHRQEIFGKSSIDMFLGTLADSMGIKDDDIDLVNTIPQHIIDTTNGTGKKKFTKTQQKSRDQDVVNVQIKSNKLIMQSKNDPESRNYKIDDFAISSIFNSLSGFNNSKFVNLFEVATSTGSGTKSSNNTNANSSKKRKLEELEVSPANSNSSLMSDSKKIKIDSPEDLFVTKPESTQEKLVDKSFIPENIWNWSQWAEL |
Length | 1165 |
Position | Tail |
Organism | Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) (Kluyveromyces polysporus) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Saccharomycetaceae> Vanderwaltozyma. |
Aromaticity | 0.04 |
Grand average of hydropathy | -1.137 |
Instability index | 52.67 |
Isoelectric point | 9.84 |
Molecular weight | 131320.57 |
Publications | PubMed=17494770 |
Annotated function |
|
GO - Cellular Component | core mediator complex GO:0070847 IEA:EnsemblFungi mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | RNA polymerase II activating transcription factor binding GO:0001102 IEA:EnsemblFungi TFIIE-class transcription factor complex binding GO:0001095 IEA:EnsemblFungi TFIIH-class transcription factor complex binding GO:0001097 IEA:EnsemblFungi transcription coactivator activity GO:0003713 IEA:EnsemblFungi |
GO - Biological Process | negative regulation of transcription by RNA polymerase II GO:0000122 IEA:EnsemblFungi positive regulation of invasive growth in response to glucose limitation GO:2000219 IEA:EnsemblFungi positive regulation of transcription by RNA polymerase II GO:0045944 IEA:EnsemblFungi regulation of establishment of protein localization to chromosome GO:0070202 IEA:EnsemblFungi RNA polymerase II preinitiation complex assembly GO:0051123 IEA:EnsemblFungi |
Binary Interactions |
Repeats | >MDP24776 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 8| 291.74| 19| 19| 251| 269| 1 --------------------------------------------------------------------------- 145- 163 (31.70/ 6.22) QQAQLRQQAAQ.QLRTQQQQ 239- 258 (36.48/ 8.55) QQQQQQQAQAQaQQQQQQQQ 259- 278 (40.21/10.37) QQQQQQQQQQQqQQQQQQQQ 279- 297 (44.61/12.51) QQQQQQQQQQQ.QQQQQQQQ 298- 315 (36.15/ 8.38) QQQQQVQ.AQA.QAQAQQQQ 504- 522 (33.81/ 7.24) QNNNQQQQQQQ.QQRNQQSQ 670- 686 (33.76/ 7.22) QQQSQTQ..PQ.QQQPQQQQ 687- 705 (35.02/ 7.83) QPPQQQPQPQQ.QQQLPRQQ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 78.65| 15| 15| 739| 753| 2 --------------------------------------------------------------------------- 752- 767 (26.64/ 7.14) AQaQAQAQAQAQAQAQ 768- 783 (25.98/ 6.76) AQaQAQAQAQVQAQAQ 784- 799 (26.03/ 6.79) AQaQAQAQAQPQVQPQ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 58.95| 19| 29| 444| 472| 4 --------------------------------------------------------------------------- 449- 472 (24.64/17.12) PPLINNNTvNNNGNQIttnpQANV 485- 503 (34.32/ 7.72) NQFIPNQN.NNNSNQF....NANV --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 129.58| 26| 30| 352| 377| 5 --------------------------------------------------------------------------- 352- 377 (45.61/21.29) QEAMEACKNFRKTQYGNNMTDANRQN 385- 410 (42.92/19.58) QKALRKIQSMRMAQMGNKNANSNTNN 808- 832 (41.06/18.40) QPQIPNSDS.SKAQGYNQMMNNNSVD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 78.18| 23| 28| 89| 115| 7 --------------------------------------------------------------------------- 89- 111 (38.26/24.39) SKSSGNNNPSNTSTNTNTNVNVN 122- 144 (39.93/16.45) SSAANSDKMGNFPLNMNSQMFLN --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 81.80| 26| 28| 1096| 1123| 9 --------------------------------------------------------------------------- 1071- 1092 (21.31/ 6.82) NNSKFVNL...FEVATS.TgSGTKSS..... 1098- 1123 (42.61/33.77) NSSKKRKL...EELEVS.P.ANSNSSLMSDS 1125- 1150 (17.88/ 7.34) ....KIKIdspEDLFVTkP.ESTQEKLVDKS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 65.59| 22| 28| 889| 913| 10 --------------------------------------------------------------------------- 889- 913 (33.01/25.12) SPASTTSvqnTPIPISPS...VVKSTAG 917- 941 (32.58/17.09) TPSPLTT...TDISTSRSslnVSQTSSG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 57.87| 18| 28| 1020| 1037| 11 --------------------------------------------------------------------------- 1020- 1037 (29.82/17.41) KTQQKSRDQDVVNVQIKS 1045- 1062 (28.05/15.89) KNDPESRNYKIDDFAISS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 46.97| 15| 93| 647| 661| 15 --------------------------------------------------------------------------- 167- 181 (22.70/ 7.76) QLTPQQQQIINQMKV 647- 661 (24.27/ 8.93) QLLRRQQLIQRQQQA --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) ALRKI 2) FIRKYIN 3) VKKAKKL | 387 378 882 | 391 384 888 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab