<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24748
Description |
Predicted protein (Fragment) |
Sequence | MSQNNRRTSGSKFTGCPKASKIRQLEKDCRKMSQNNRRTSGSKFTGCTKASKIRQLESALDYAHRAIRSLNKEHRKLGIENDVLRSGLQDENRVLTEEQRNAELLLKKQDEGRKKAKLQELKLQKVFIQHLLNAVLEKCTAESQTCSPSTKSIGSECTTECAEADVQATSEVTVVSVETQTDAVPKRHQSRAVRAWQSFCGQGKDCRKMSQNNRRTSGSKFTGCPKASKIRQLESALDYAHRAIRSLNKELRKLGIENDVLRSGLQDENRVLTEEQRNAELLLKKQDEGRKKAKLQELKLQKVFIQHLLNAVLEKVLATSAPALAERMEKDLGSSCGKLQEEREAFVSQIAEQTKSNAAKDALLAELKRQIGQTKTRPHCTAESQTCSPSTKSIGSECTTECAEADVQATCEVTVVVLTEEQRNAELLLKKQDEGRKKAKLQELKLQKVFIQHLLNAVLEKVLATSAPALAERMEKDLGSSCGKLQEEREAFVSQIAEQTKSNAAKDALLAELKRQIGTRPHCTAESQTCSPSTKSIGSECTTECAEADVQATSEVTVVSVETQTDAVPKRHQNRAVRAWQSFCGHGKDCRKMLQNNRRTSKSKFTGCPKASKIRQLESALDYAHRAIRSLNKDLRKLGIENDVLRSGLQDENRVLTEEQRNAELLLKKQDEGRKKARLQELKLQKVFIQHLLNARHQNRAVRAWQSFCGQESALDYAHRAIRSLNKDVRKLGIAPIHLYFKRVLTEEQRNVELLLKKQDEGRKKAKLQELKLQKVFIQHLLNAVLEKVLATSAPALAERKEKDLGSSCGKLQEEREAFVSQIAEQTKSNAAKDALLAELKRQIGQTKTRPHCTAESQTCSPSTESIGTECNNECAEADVQATSEVTVVSVETQTDAVPKRHQNRAVRAWQSFCGQGKDCRKMSQNNRRTSGSKFTGCPKASKIRQLESALDYAHRAIRSLNKELRKLGIENDVLRSGLQDENRVLTEEQRNAELLLKKQDEGRKKAKLQELEKTVEKCRKTTGGQVDPSLPDARKESALDYAHRAIRSLNKDLRKLGIENDVLRSGLQDENRVLTEEQRNAELLFKKQDEGRKKAKLQELKLQKVFIQHLLNAVLEKVLATSAPALAERKEKDLGSTCGKLKEEREAFVSQIAEQTKSNAAKDALLAELKRQIGQTKTRPHVLATSAPALAERKEKDPGSSCGKLQEEREAFVSQIAEQTKSNAAKDALLAELKRQIGQTKTRPHCTAESQTCSPSTKSIGSKCTTECSEADVQATSEVTVVSVETQTDAVPKRHQNRAVRAWQSFCGQ |
Length | 1310 |
Position | Middle |
Organism | Nematostella vectensis (Starlet sea anemone) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Cnidaria> Anthozoa> Hexacorallia> Actiniaria>
Edwardsiidae> Nematostella.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -0.773 |
Instability index | 59.66 |
Isoelectric point | 9.37 |
Molecular weight | 146469.86 |
Publications | PubMed=17615350
|
Function
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP24748
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
12| 1977.46| 148| 176| 80| 227| 1
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27- 202 (314.32/208.21) .KDCRK..MSQNNRRTSGSKFTGCTKAskirqlesaldyahrairslnkehrklgiENDVL..RSGLQDE......NRVL..TEEQRNA...ELLLKKQDEGRKKAKLQELKLQKVFIQHLLNAVLEKC..TAES..QTCSPS.....TKSIGSECT..TECAEADVQA.TSEVTVVSVETQTDAVPKRHQSRAVRAWQSFCGQ
203- 338 (202.06/130.64) GKDCRK..MSQNNRRTSGSKFTGCPKAskirqlesaldyahrairslnkelrklgiENDVL..RSGLQDE......NRVL..TEEQRNA...ELLLKKQDEGRKKAKLQELKLQKVFIQHLLNAVLEKV..LA.....TSAPAlaermEKDLGSSC..............................................GK
341- 415 (105.66/64.02) ....................................................................................EEREAfvsQIAEQTKSNAAKDALLAELKRQ...IGQ..TKTRPHC..TAES..QTCSPS.....TKSIGSECT..TECAEADVQA.TCEVTV............................
417- 495 (93.84/55.86) ..............................................................................VL..TEEQRNA...ELLLKKQDEGRKKAKLQELKLQKVFIQHLLNAVLEKV..LA.....TSAPAlaermEKDLGSSCGklQEEREAFVSQ...................................
496- 586 (173.21/110.70) .......................................................................................IA...E...QTKSNAAKDALLAELKRQIGTRPH........C..TAES..QTCSPS.....TKSIGSECT..TECAEADVQA.TSEVTVVSVETQTDAVPKRHQNRAVRAWQSFCGH
587- 711 (204.11/132.06) GKDCRK..MLQNNRRTSKSKFTGCPKAskirqlesaldyahrairslnkdlrklgiENDVL..RSGLQDE......NRVL..TEEQRNA...ELLLKKQDEGRKKARLQELKLQKVFIQHLLNA................................................................RHQNRAVRAWQSFCGQ
712- 811 (140.52/88.12) .ESALD..YAHRAIRSLNKDVRKLGIA...........................................pihlyfKRVL..TEEQRNV...ELLLKKQDEGRKKAKLQELKLQKVFIQHLLNAVLEKV..LA...............................................TSAPALAERKE....KDLGSSCGK
812- 916 (211.18/136.94) LQEEREafVSQ............................................................................IA...E...QTKSNAAKDALLAELKRQ...IGQ..TKTRPHC..TAES..QTCSPS.....TESIGTECN..NECAEADVQA.TSEVTVVSVETQTDAVPKRHQNRAVRAWQSFCGQ
917- 1062 (167.03/106.43) GKDCRK..MSQNNRRTSGSKFTGCPKAskirqlesaldyahrairslnkelrklgiENDVL..RSGLQDE......NRVL..TEEQRNA...ELLLKKQDEGRKKAKLQELE..........KTV.EKCrkTTGG..QV.DPS.....LPDARKESA..LDYAHRAIRSlNKDLRKLGIEND......................
1064- 1141 (131.07/81.59) ............................................................L..RSGLQDE......NRVL..TEEQRNA...ELLFKKQDEGRKKAKLQELKLQKVFIQHLLNAVLEKV..LATSapALAERK.....EKDLGSTC..............................................GK
1142- 1186 (30.63/12.18) LKEEREafVSQIAEQTKSNAAKDALLA..................................................................................ELKRQ...IGQ..TKTRPHV..LAT......................................................................
1187- 1310 (203.83/131.86) ........................................................SAPALaeRKE.KDP......GSSCgkLQEEREAfvsQIAEQTKSNAAKDALLAELKRQ...IGQ..TKTRPHC..TAES..QTCSPS.....TKSIGSKCT..TECSEADVQA.TSEVTVVSVETQTDAVPKRHQNRAVRAWQSFCGQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 253.51| 28| 328| 612| 640| 2
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51- 78 (63.70/42.72) SKIRQLESALDYAHRAIRSLNKEHRKLG
228- 255 (63.49/42.53) SKIRQLESALDYAHRAIRSLNKELRKLG
612- 639 (62.84/41.98) SKIRQLESALDYAHRAIRSLNKDLRKLG
942- 969 (63.49/42.53) SKIRQLESALDYAHRAIRSLNKELRKLG
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