<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24746

Description Predicted protein
SequenceMLQNNRRTSGSKFTGCPKASKIRQLESALDYAHRAIRSLNKDLRKLGIENDVLRSGLQDENRVLTEEQRNAELLLKKQDEGRKKAKLQELKLQKVFIQHLLNAVLEKVLATSAPALAERKEKDLGSSCGKLQEERVLATSAPALAERKEKDLGSVCGKLQEERGAFVSQIAEQTKSNAAKDALLAELKRQIGQTKTRPHCTAESQTCYPSTKSIGSECTTECAEADVQATSEVTVVLLAELKRQIGQTKTRPHCTAESQTCSPSTKSIGSECTTECTEADVQATSEVTVVSVETQTDAVPKRHQNRAVRAWQSFCGQFFRRVRRFYIPSLNLIGKRLSKNVAKQPEDKWIQVHRMSESLKDPAVGIGSGLCPPCYSKLEQRAQKTCGRVLTEEQRNAELLLKKQDEGRKKAKLQELKLQKVFIQHLLNAVLEKVLATSAPALAERKEKDLGSSCGKLQEEREAFVSQIAEQTKSNAAKDALLAELKRQIGQTKTRPHCTAESQTCSPSAKSIWSECTTECAEADVQATSEVTVVSVETQTDAVPKAPKPCSACLAEFLWPAGFANAAFDQGEENRTLAFLEKYNQVAPNEAYKSSEASWNYATNLTVENLNKRTQASLTYSAFLEEARKKAKKFDLTKLSNDTRRQIKMVTETASSSDKDVQKTLNDVEGKMDQIYGSGKVIDTDGSKLSLDPHLYKILSNSRDYERLKALTEEQRNAELLLKKQDEGRKKAKLQELKLQKVFIQHLLNAVLEKVLATSAPALAERKGKDLGSSCGKLQEEREAFVSQIAEQTKSNAAKDALLAELKRKIGQTKTRPHCTAESQTCSPSTKSIGTECTTECAEADVQATSEVTVVSVETQTDAVPKESALDYAHRAIRSLNKEHRKLGIENDVLRSGLQDENRALTEEQRNAELLLKKQDEGRKKAKLQELKLQKVFIQHLLNAVLEKVLATSAPALAERRHLFHKLQSKRRAMPQKMPSKIRQLEAFVSQIAKQTKSNAAKDALLAELKRQIGQTKTRPHMQRKDEKYLLYCVRTGQHTRCCRVHKKFDRLLAELKRQIAQTKTRPHCTAESQTCSPSTKNIGSECTTECAEADVQATSEVTVVVLTEEQRNAELLLKKQDEGRKKAKLQELKLQKVFIQHLLNAVLEKVLATSAPALAERKEKDPRSSCGKLQEEREAFVSQIAEQTKSNAAKDALLAELKRQIGQTKTCQHCTAESQTCSPSTKSIGSECTTECAEADVQATSEVTVVSVETQTDAVPKRHQNRAVRAWQSFCGQESALDYAHRAIRSLNKEHRKLGIENDVLRSGLQDENRVLTEEQRNAELLLKKQDEGRKKAKLQELKLQKVFIQHLLNAVLEKVLATSAPALAERKEKDLGSSCGKLQEEREAFVSQIAEQTKSNAAKDALLAELKRQIGQTKTRPHCTAESHTCSPSTKSIGSECTTECAEADVQATSEVTVVSVETQTDAVPKRHQNRAVRTWQSFCGQGKDCRKMLQNNQRTSGSKFTGCPKASKIRQLESALDYAHRAIRSLNKELRKLGIENDVLRSGLQDENRVLTEEQRNAELLLKKQDEGRKKAKLQELKLQKVFIQHLLNAVLEKRHQNRAVRAWQSFCGHRHQNRAVRAWQRFCGQCLILLITKYNIFALSVYYYRGTKTVKCVPGRVSVASGLHFEVCKRKTIPAIKAHQLFVVRSIAVHADTEYCVVITSDDKCSLIAYFVCIHSGNIHRYYFNFFCDDIL
Length1740
PositionMiddle
OrganismNematostella vectensis (Starlet sea anemone)
KingdomMetazoa
LineageEukaryota> Metazoa> Cnidaria> Anthozoa> Hexacorallia> Actiniaria> Edwardsiidae> Nematostella.
Aromaticity0.04
Grand average of hydropathy-0.623
Instability index55.34
Isoelectric point9.20
Molecular weight194631.79
Publications
PubMed=17615350

Function

Annotated function 
GO - Cellular Component
membrane	GO:0016020	IEA:InterPro

GO - Biological Function
metallopeptidase activity	GO:0008237	IEA:InterPro
peptidyl-dipeptidase activity	GO:0008241	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24746
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            19|    1191.26|      52|      52|     183|     234|       1
---------------------------------------------------------------------------
   26-  117 (39.53/19.32)	ESALDYahR..AIRSLNKDL..RKLGI........................ENDV...............................................lrsglqdenrvlteeqrnaelllkkqdegrkkaklqelklqkvfiqhLLNAVLE...KVL......ATSA..P.A.............LA
  118-  149 (40.80/20.21)	ERKEKD..L..GS.SCGK....LQEER...........................VLA..........TSA..............................PA...............................................L.AERKE....................................
  150-  202 (62.68/35.48)	.............KDLGSVCgkLQEER........................GAFVSQ..........IAE..............................QT.......................................ksnaakdaLLAELKR...QIG......QTKT.RPHC.............TA
  203-  256 (107.59/66.82)	ESQTCY..P..STKSIGSEC..TTECA........................EADVQA..........TSE..............................VT.............................................vvLLAELKR...QIG......QTKT.RPHC.............TA
  257-  288 (55.96/30.79)	ESQTCS..P..STKSIGSEC..TTECT........................EADVQA..........TSE..............................VT..........................................................................................
  444-  500 (89.71/54.34)	ERKEKD..L..GS.SCGK....LQEER........................EAFVSQ..........IAE..............................QT.......................................ksnaakdaLLAELKR...QIG......QTKT.RPHC.............TA
  501-  532 (54.50/29.77)	ESQTCS..P..SAKSIWSEC..TTECA........................EADVQA..........TSE..............................VT..........................................................................................
  765-  821 (87.95/53.11)	ERKGKD..L..GS.SCGK....LQEER........................EAFVSQ..........IAE..............................QT.......................................ksnaakdaLLAELKR...KIG......QTKT.RPHC.............TA
  822-  866 (65.50/37.45)	ESQTCS..P..STKSIGTEC..TTECA........................EADVQA..........TSE..............................VT............................................................vvsvetQTDA.VPK................
  867-  958 (51.16/27.44)	ESALDYahR..AIRSLNKEH..RKLGI........................ENDVLRsglqdenralTEEqrnaelllkkqdegrkkaklqelklqkvfiQH...............................................LLNAVLE...KVL......ATSA..P.A.............LA
  959- 1037 (33.68/15.24)	ER........................RhlfhklqskrrampqkmpskirqlEAFVSQ..........IAK..............................QT.......................................ksnaakdaLLAELKR...QIG......QTKT.RPHMqrkdekyllycvrTG
 1038- 1071 (46.26/24.02)	QHTRCC..R..VHKKFD...................................................................................................................................rLLAELKR...QIA......QTKT.RPHC.............TA
 1072- 1160 (77.91/46.11)	ESQTCS..P..STKNIGSEC..TTECA........................EADVQA..........TSE..............................VT........vvvlteeqrnaelllkkqdegrkkaklqelklqkvfiqhLLNAVLE...KVL......ATSA..P.A.............LA
 1161- 1217 (74.83/43.96)	ERKEKD..P..RS.SCGK....LQEER........................EAFVSQ...............................................................................iaeqtksnaakdaLLAELKR...QIG......QTKT.CQHC.............TA
 1218- 1278 (88.61/53.57)	ESQTCS..P..STKSIGSEC..TTECA........................EADVQA..........TSE..............................VT.......................................vvsvetqtDAVPKRH...QNR......AVRAwQSFC.............GQ
 1279- 1370 (40.35/19.90)	ESALDY..AhrAIRSLNKEH..RKLGI........................ENDV...............................................lrsglqdenrvlteeqrnaelllkkqdegrkkaklqelklqkvfiqhLLNAVLE...KVL......ATSA..P.A.............LA
 1371- 1427 (89.71/54.34)	ERKEKD..L..GS.SCGK....LQEER........................EAFVSQ..........IAE..............................QT.......................................ksnaakdaLLAELKR...QIG......QTKT.RPHC.............TA
 1428- 1459 (56.23/30.98)	ESHTCS..P..STKSIGSEC..TTECA........................EADVQA..........TSE..............................VT..........................................................................................
 1528- 1616 (28.30/11.49)	........R..AIRSLNKEL..RKLGI........................ENDVLRsglqdenrvlTEEqrnaelllkkqdegrkkaklqelklqkvfiQH...............................................LLNAVLEkrhQNR......AVRAwQSFC.............G.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             8|     783.35|      91|     319|     339|     443|       2
---------------------------------------------------------------------------
   53-   99 (87.40/44.53)	................................LRSGLQDEN.............RVLTEE...QRNAELLLKKQDEGRKKAKLQELKLQKVFIQH....
  339-  429 (181.37/114.52)	KNVAKQPED...KWIQVHRMSESLK..DPAVGIGSGLCPPCYSKLEQRAQKTCGRVLTEE...QRNAELLLKKQDEGRKKAKLQELKLQKVFIQHLLNA
  573-  641 (88.28/42.53)	ENRTLAFLE...KYNQVAP.NEAYKssEASWNYATNLTVENLNKRTQ.ASLTYSAFL.................EEARKKAK..KFDLTK.....LSN.
  659-  750 (151.69/83.08)	KDVQKTLNDvegKMDQIY.GSGKVI..DTD.GSKLSLDPHLYKILSNSRDYERLKALTEE...QRNAELLLKKQDEGRKKAKLQELKLQKVFIQHLLNA
  896-  938 (64.33/29.78)	..................................SGLQDEN.............RAL...teeQRNAELLLKKQDEGRKKAKLQELKLQKVFI......
 1106- 1142 (57.79/25.60)	.......................................................VLTEE...QRNAELLLKKQDEGRKKAKLQELKLQKVFIQH....
 1306- 1352 (87.40/44.53)	................................LRSGLQDEN.............RVLTEE...QRNAELLLKKQDEGRKKAKLQELKLQKVFIQH....
 1549- 1591 (65.10/30.27)	..................................SGLQDEN.............RVL...teeQRNAELLLKKQDEGRKKAKLQELKLQKVFI......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.08|      14|     318|     430|     443|       3
---------------------------------------------------------------------------
  430-  443 (26.54/17.95)	VLEKVLATSAPALA
  751-  764 (26.54/17.95)	VLEKVLATSAPALA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     141.22|      25|    1492|       1|      25|       4
---------------------------------------------------------------------------
    1-   25 (54.69/35.11)	MLQNNRRTSGSKFTGCPKASKIRQL
  967-  985 (32.33/17.50)	.LQSKRRAMPQKM...P..SKIRQL
 1495- 1519 (54.20/34.72)	MLQNNQRTSGSKFTGCPKASKIRQL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     187.40|      29|    1168|     289|     317|       5
---------------------------------------------------------------------------
  289-  317 (69.22/48.22)	VVSVETQTDAVPKRHQNRAVRAWQSFCGQ
  533-  545 (18.73/ 7.06)	VVSVETQTDAVPK................
 1460- 1488 (68.91/47.97)	VVSVETQTDAVPKRHQNRAVRTWQSFCGQ
 1618- 1633 (30.54/16.69)	.............RHQNRAVRAWQRFCGQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24746 with Med7 domain of Kingdom Metazoa
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