Description | Mediator of RNA polymerase II transcription subunit 7 |
Sequence | MADQQQPQPNSIAQVPPGPPLFWKRFTPENIERIEKLRAEKISNYKIADNSTYKLPPRIPDLPTELRYLQPPEPPATGAYRTFGQVQTIENDIPPLEGVEQLYTPPGTPTGNAKHEDRKLILKRFAKSLLLNFLELVEP |
Length | 139 |
Position | Middle |
Organism | Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Leotiomycetes> Helotiales> Sclerotiniaceae> Sclerotinia. |
Aromaticity | 0.08 |
Grand average of hydropathy | -0.706 |
Instability index | 54.01 |
Isoelectric point | 6.60 |
Molecular weight | 15824.92 |
Publications | PubMed=21876677 |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery.
ECO:0000256 RuleBase:RU364060 |
GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central mediator complex GO:0016592 IBA:GO_Central |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central |
Binary Interactions |
Repeats | >MDP24708 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 72.51| 19| 32| 59| 78| 1 --------------------------------------------------------------------------- 59- 78 (34.32/15.60) IPDLPTELRYLQPPEPPaTG 93- 111 (38.19/14.53) IPPLEGVEQLYTPPGTP.TG --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) ATGAYRTFGQVQTIENDIPPLEGVEQLYT 2) PLFWKRFTPENIERIEKLRAEKISNYKIADNSTYKLPPRIPDLPTELRYLQPPEP | 76 20 | 104 74 |
© 2021 Shailesh Lab
Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab