<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24669
Description |
Mediator of RNA polymerase II transcription subunit 15 |
Sequence | MDVSGQETDWRSPTFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTAGAAGLGLPTRGPGQALGGMGGLGAMGQPMPLSGQPPPGTSGMAPHNMAVVSTAAPQTQLQLQQVALQQQQQQFQAQQQVALQQQQQQQQFQAQQSAMQQQFQAAVQQQQQLQQQQHLIKLHQQNQQQMQQQQLQRMAQLQLQQQQQQQALQAQPPIQQPPLQQPPPPPSQALPQQLQPPQHHQAPPQPPPQSQPQPLVSQAPALPGQMLYTQPQLKLVRAPMVVQQPQVQPQVPPQTAVPTAQASQIVGPGVQVSQSSLTVLSSPSPGQQVHTPQSMPPPPQPSPQPGPPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVPPTKQQYLCQPLLDAVLANIRSPVFNHSLYRTFVPAMTAIHGPPITAPVVSTRKRKFEEDERQTIPNVLQGEVARLDPKFLVNLDPSHCSSNGAVHLICKLDDKDLPSVPPLELSVPADYPAQSPLWINRQWQYDANPFLQSVHQCMTSRLLQLPDKHSVTALLNTWAQSVHQACLSAA |
Length | 711 |
Position | Tail |
Organism | Bos taurus (Bovine) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Laurasiatheria> Artiodactyla> Ruminantia> Pecora> Bovidae>
Bovinae> Bos.
|
Aromaticity | 0.04 |
Grand average of hydropathy | -0.624 |
Instability index | 85.38 |
Isoelectric point | 9.41 |
Molecular weight | 77722.62 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364148
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP24669
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
5| 245.74| 36| 36| 373| 408| 3
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277- 322 (41.21/ 8.21) ...QAPPQP.PPQSQPQ..........PLV.SQAP..AL..PG...QM..LytqpqlklvrapmvvQQPQ
323- 360 (50.28/11.79) VQPQVPPQTAVPTAQAS..........QIV.GPGV..QV.SQS...SLtvL...............SSPS
373- 408 (76.40/22.10) PPPQPSPQPGPPSSQPN..........SNV.SSGP..AP.SPS...SF..L...............PSPS
409- 447 (37.19/ 6.63) ..PQPSQSPVTARTPQN..........FSVpSPGPlnTPvNPS...SV..M..............sPAGS
523- 568 (40.66/ 8.00) AVPTPPPPPVPPTKQQYlcqplldavlANI.RS.P..VF.NHSlyrTF..V...............PA..
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 91.24| 17| 18| 200| 217| 4
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179- 194 (32.90/11.51) QQQ...QQFQAQQS..AMQQQ
200- 217 (30.95/13.75) QQQ...QQLQQQQHLiKLHQQ
219- 238 (27.39/ 8.30) QQQmqqQQLQRMAQL.QLQQQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 56.25| 15| 22| 88| 107| 5
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88- 102 (26.99/ 9.92) LTGGPTAGAAGLGLP
110- 124 (29.26/ 7.98) LGGMGGLGAMGQPMP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.79| 11| 27| 669| 679| 7
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669- 679 (24.21/14.91) NPFLQSVHQ.CM
697- 708 (19.59/10.65) NTWAQSVHQaCL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 65.08| 18| 22| 605| 622| 8
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605- 622 (32.84/17.92) VARLDPKFLVNLDPSHCS
630- 647 (32.24/17.47) ICKLDDKDLPSVPPLELS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 87.62| 29| 34| 456| 486| 9
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456- 486 (40.72/38.12) LDKLKQLSKYIePLRRMiNKID.KNEDRKKDL
493- 522 (46.90/33.04) LDILTDPSKRC.PLKTL.QKCEiALEKLKNDM
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