<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24620

Description "Heat Shock Protein 70, cytosolic"
SequenceMSKAEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGARTTPSYVAFTDSERLIGDSAKNQTAMNPMNTVFDAKRLIGRKFSEPQVQADIKDWSFKVEAGEADKPMIVVEFHGEKKKFSAEEISSMVLVKMKEVAEAYLGKDIKNAVVTVPAYFNDSQRQATKDAAVISGLNCLRIINEPTAAAIAYGLDKRHEANGAEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDARLLQHFIAEFKRKNKKDITGNPKALRRLRSACERAKRTLSSTAQTSIEIDSLFEGVDFYTSITRARFEELCMDLFRKCMDPVEKTLRDAKMDKSQVHEVVLVGGSTRIPKVQQLLSDFFNGKDLCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVSPLSMGLETVGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERSRTRDNHLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKGSGQKNKITITNDKGRLSKEDIERMVQDAEKYKAEDEEHKKKIEAKNAVENYAYNMRNTMNDTNVGGKLDADDKKTIEDAVEAAITWLDGNQTAEVDEFEDKLKELEGVCNPIISKMYQNASGAPGADMGGAPGAEDAGGASSGPKIEEVD
Length650
PositionUnknown
OrganismOstreococcus lucimarinus (strain CCE9901)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Chlorophyta> Mamiellophyceae> Mamiellales> Bathycoccaceae> Ostreococcus> unclassified Ostreococcus.
Aromaticity0.06
Grand average of hydropathy-0.415
Instability index32.53
Isoelectric point5.04
Molecular weight71027.36
Publications
PubMed=17460045

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24620
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.56|      19|      21|       9|      27|       2
---------------------------------------------------------------------------
    9-   27 (37.81/29.14)	IGIDLG..TTYSCVGVWQHDR
   31-   51 (29.75/21.29)	IANDQGarTTPSYVAFTDSER
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     139.97|      37|     139|      84|     122|       3
---------------------------------------------------------------------------
   84-  122 (56.38/44.27)	QVQADIKDWSFkvEAGEADKPMIVVEFHGEKKKFSAEEI
  193-  218 (28.73/14.81)	.............EANGAEKNVLIFDLGGGTFDVSLLTI
  224-  259 (54.86/36.64)	EVKATAGDTHL...GGEDFDARLLQHFIAEFKRKNKKDI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     111.67|      33|     190|     360|     392|       4
---------------------------------------------------------------------------
  360-  392 (55.64/31.14)	FNGKDLCKSINPDEAVAYGAAVQAAILSGEGNE
  559-  591 (56.04/31.41)	MNDTNVGGKLDADDKKTIEDAVEAAITWLDGNQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24620 with Med37 domain of Kingdom Viridiplantae
Unable to open file!