<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24590

Description Uncharacterized protein
SequenceMYLSAFSSSASSHGGGDSEARDSSTVVAVDRDKNSQQAVKWAVDRLLARGSVLQLVHVKPQQNAEAGADAEMQQMFISYRGYCARKGMQLKEVILDGSDISKAIVEYATSNAITDIVVGASTRNTFIRKFRNPDVPTCLMKMVPDYCTVHVIHKGKAIQVKAAKAPAPFTTLPPKQYSQSSIESDGYPRSRGDWKKISNQSSPKANRPSVDRLSGFAKAPTRERPLSGARSAPPKDFDDYIDFIAPPRPSVTRSSFSDDVDFPLSLELPSMDFGDSLELSLSASMSIESLSSAGKDVETEMRRLRLELKQTMEMYNSACKEAIDAKQKAAQMHQMKMEESKKYQELRNAEEEALALVQMEKAKCRAALEAAEAAQRIAELEAQKRLRAEWKAKREAEERKRATEAMNNTDLRYRRYSIDDIEAATHKFDKALKIGEGGYGPVYKAVMDHTNVAIKILRPDASQGRKQFQQEIEVLSCMRHPNMVLLLGACPEYGCLVYEYMDYGSLEDRLCRRGKTLPIPWNIRFRIAADIATGLLFLHQAKPEPLVHRDLKPANILLDHNFVSKISDVGLARLVPQSAAAAEATQYRMTSTAGTFCYIDPEYQQTGMLTTMSDIYSLGILLLQIITARSPMGLTHHVESAIERGTFQEVLDPMVTDWPVEEALVFAKLALRCAELRKKDRPDLGKEILPELNRLRCLSQEYDASKVSSTSTTCSSSAPYSFGGDDVSTP
Length730
PositionTail
OrganismOryza sativa subsp. indica (Rice)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza> Oryza sativa.
Aromaticity0.07
Grand average of hydropathy-0.421
Instability index50.68
Isoelectric point7.52
Molecular weight81206.69
Publications
PubMed=15685292

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24590
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.43|      13|      16|     231|     246|       1
---------------------------------------------------------------------------
  231-  243 (24.69/10.42)	SAPPKDFDDYIDF
  250-  262 (20.74/12.46)	SVTRSSFSDDVDF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      94.07|      21|      21|     309|     329|       3
---------------------------------------------------------------------------
  309-  329 (34.60/22.51)	KQTMEMYNS.ACKEAIDAKQKA
  333-  353 (29.02/17.72)	HQ.MKMEESkKYQELRNAEEEA
  354-  374 (30.45/18.95)	LALVQMEKA.KCRAALEAAEAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     381.92|     125|     462|      44|     183|       4
---------------------------------------------------------------------------
   44-  183 (191.45/202.39)	DRLLARGSVLQLvhvkPQQ.NAEAGADAEMQQMFISYRG..YCARKGMQLKEVILDG......SDISKA.IVEYATSNAITDIVVGASTRNTFIrkFRNPDV.PTCLMKMVPDYCTVHVIhkgkAIQVKAAKAPAPFTtlppkQYSQSSIE
  508-  643 (190.47/157.34)	DRLCRRGKTLPI....PWNiRFRIAADIATGLLFLHQAKpePLVHRDLKPANILLDHnfvskiSDVGLArLVPQSAAAAEATQYRMTSTAGTFC..YIDPEYqQTGMLTTMSDIYSLGIL....LLQIITARSPMGLT.....HHVESAIE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.06|      13|      15|     196|     208|       5
---------------------------------------------------------------------------
  196-  208 (22.85/12.93)	KISN.QSSPKANRP
  212-  225 (18.22/ 8.84)	RLSGfAKAPTRERP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24590 with Med32 domain of Kingdom Viridiplantae
Unable to open file!