<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24588

Description Uncharacterized protein
SequenceMTIVVAVDRDRNSQLAVKWVVDHLLTGASNIILLHIAVHPPAANHGFAMAEATHGALEAEMREIFVPFRGFCTRNGVHVSELVLEEADVSKALIEFITVNKIQSIALGASNRNAFTKKFKNADVPSSLMKGAPDYCNIYVVAKGKSVNVRLAKCGVDGGCGGGGGYEGDSSIRSLYTRRCSRGKLPPATPSPDSSRRSVDSRTLPELTTRPPFRERSLPSSSSKPVVLSSRAAPDCGGGGVDGSYRSTRRSVSNESFVGDLDFGQSSRFSSMDFCDSLDMSSLSASPRESSSPLSAPQREVEVEMRRLRLELKQTMTYGFAMAEATHGALEAEMREIFVPFRGFCTRNGVRALDAISSHDFRYRRYNIDDIELATERFSDELKIGEGGYGPVYRASLDHTPVAIKVLRPDAQQGRKQFQQEVEVLSCIRHPNMVLLLGACPDYGCLVYEYMDNGSLEDRLFRRGGTPPIPWSQRFRISAEIATALLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPAVADSVTQYRLTATAGTFCYIDPEYQQTGKLGVKSDIYSLGVLLLQVLTARPPMGLTHHVEKAIDAGTFAQMLDVTVKDWPVDDAIGFAKLALKCTEMRRRDRPDLATVILPELNRLRNLGHAYEARMSAAAADAAAHAQDNVGSPTVVGASWRTAES
Length685
PositionTail
OrganismOryza sativa subsp. indica (Rice)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza> Oryza sativa.
Aromaticity0.07
Grand average of hydropathy-0.230
Instability index49.34
Isoelectric point8.14
Molecular weight75027.53
Publications
PubMed=15685292

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24588
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     151.97|      34|     271|      45|      78|       1
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   45-   78 (76.36/43.56)	HGFAMAEATHGALEAEMREIFVPFRGFCTRNGVH
  318-  351 (75.60/43.07)	YGFAMAEATHGALEAEMREIFVPFRGFCTRNGVR
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.34|      14|      17|     178|     192|       2
---------------------------------------------------------------------------
  178-  192 (24.76/17.17)	RRC..SRgKLPPATPSP
  196-  211 (21.58/ 9.72)	RRSvdSR.TLPELTTRP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.31|      12|      75|     160|     174|       3
---------------------------------------------------------------------------
  160-  174 (21.24/20.60)	CGGGGGyegDSSIRS
  236-  247 (27.07/15.64)	CGGGGV...DGSYRS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     152.29|      48|     137|     383|     460|       4
---------------------------------------------------------------------------
  409-  460 (80.67/89.56)	PDAQQ.GRKQFQQEVEVLSCIrhpnMVLLLGACPDYGCL..VYEYMDNGSLEDRL
  550-  600 (71.62/31.32)	PEYQQtGKLGVKSDIYSLGVL....LLQVLTARPPMGLThhVEKAIDAGTFAQML
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     150.51|      52|     134|     471|     531|       5
---------------------------------------------------------------------------
  471-  531 (68.86/65.17)	WSqrfrISAEIATALLFLHQTKpepLVHRDlKP..ANILL.DRNYVSKISDVGLARLvPPAVAD
  607-  661 (81.66/48.46)	WP....VDDAIGFAKLALKCTE...MRRRD.RPdlATVILpELNRLRNLGHAYEARM.SAAAAD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.14|      11|      75|     214|     224|       6
---------------------------------------------------------------------------
  214-  224 (19.75/11.44)	RERSLPSSSSK
  288-  298 (19.38/11.08)	RESSSPLSAPQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24588 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) SRGKLPPATPSPDSSRRSVDSRTLPELTTRPPFRERSLPSSSSKPVVLSSRAA
181
233










Molecular Recognition Features






MoRF SequenceStartStop




NANANA