<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24550

Description Uncharacterized protein
SequenceMSTSLAAGGGLRTLAVAVTSGSGTGRGSCRAVDWAVENLLPQADRFILVHVIPAITSIPTPSGEYIPISEADNDVLATYMHDVKQRSEEIFVPFKKLCKINTVETLLLEDDNPANALLSFISESGIQMLVMGSYSSNFITRKLKGPGIPTTVLRCAPDSCDVYLIARDRIISKLSDSSASASYETSSRYSMSTQMNKGENGAGIGSEASRFNSSSAEPESPKNFKFLSISARSYIGLQISSRRSSFENHTRNEEQNLENCDDDFETFSLHSFDSIASVQREQLAVQEEVERLQLELQNTVAMYKQACEELVHAQSKALLLSSESLEEAKRVNDSLKREETLRKIAAEENTKYLKVMKELEEAKEMFAKESYERQLAELNVAREFIEKRRIVDTLLSNDRRYRKYTIDEIQIATDFFSEDLIIGEGGYGKVYKCTLDHTPVAVKVLHYDAMNKKEEFLIEVEILSQLHHPNMVLLLGGCPEKGCLVYEYMENGSLEDYLFSKGKAPLPWYVRFHIAFEMACGLSFLHNAKPEPIVHRDMKPGNILLDRNYVSKISDVGLAKLLEDVVPDNVTEYRESVIAGTIHYMDPEYQRTGTLRPKSDVYAFGVITLQLLTGRHARGVIMTVEDAIIKGSFRDILDRSAGDWPLEEAAELAQIALRCVELRCRDRPELDTEVLPVLKRLSDVTNASARVGINSRGTPSQYYCPILQEIMDDPHIAADGFTYEYRAIKAWLSKHNVSPVTKRKLQHSMLTPNQTLRSAIQEWKSGVTSFD
Length771
PositionTail
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.08
Grand average of hydropathy-0.312
Instability index49.58
Isoelectric point5.45
Molecular weight86538.30
Publications
PubMed=27557478

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24550
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     130.15|      33|      33|     180|     212|       1
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  134-  156 (29.91/15.90)	.........YS.SNFITRKLKGPGIPTTVLRCA
  180-  212 (55.06/35.24)	SASYETSSRYSMSTQMNKGENGAGIGSEASRFN
  215-  246 (45.17/27.63)	SAEPESPKNFKFLSISARSYIGLQISSRRSSF.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     125.78|      44|      48|     319|     366|       2
---------------------------------------------------------------------------
  269-  315 (63.24/43.77)	LHSFDSIASVQR..EQLAVQEEVERLQLElQNTvaMYKQACEELVHAQS
  319-  364 (62.54/58.83)	LLSSESLEEAKRvnDSLKREETLRKIAAE.ENT..KYLKVMKELEEAKE
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     195.17|      60|     637|       9|      68|       3
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    9-   68 (107.22/68.68)	GGLRTLAVAVTSGSGTGRGSCRAVDWAVEN.........................LLPQADRFILVHVIPA...ITSIPTPSGEYIPI
  619-  706 (87.95/55.06)	GVIMTVEDAIIKGSFRDILDRSAGDWPLEEaaelaqialrcvelrcrdrpeldteVLPVLKRLSDVTNASArvgINSRGTPSQYYCPI
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---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      91.96|      31|      50|     395|     426|       4
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  395-  426 (46.68/33.11)	LSNDRRYRK..YTIdEIQIATDFFSEDLIIGEGG
  445-  477 (45.28/27.28)	LHYDAMNKKeeFLI.EVEILSQLHHPNMVLLLGG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24550 with Med32 domain of Kingdom Viridiplantae
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