<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24548

Description Uncharacterized protein
SequenceMEVQRVWNLTSYPLRLLFRHSSSYAFRQTPRTLLIRSSSSSTTTSSADKPAARASARNRRNPSTTSTSDREAIRAIRLKKVEELRSKGLDPYAYEWDKTHSATQLQDIYRDLGNGEESNSENDHVSVAGRIVARRAFGKLAFLTLRDDSGTIQLYCEKERLIGDQFEDLKAHVDIGDILGARGSIKRTEKGELSVCVLSFAILTKSLLPLPDKYHGLTDIDKRYRQRYVDMIANPEVADVFRKRAKVVSEIRKTMDSLDFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYQSMMNLSEEIVTRCALAINGKLTIDYQGVEICLERPWRRETMHNLVKEASGIDFNDLGNDLEGAKKTTLSTLGKDLDNKDKASIEACQSVGHLLNEVFEIFVEPKLIQPTFVLDYPVEISPLAKLHRRSAGLTERFELFICGRELGNAFSELTDPIDQRGRLEDQIRQHEKKRAEAASRTSDKKEGTENEDDSYEVTLDDDFLTALEYGMPPASGMGLGIDRLVMLLTNSPSIRDVIAFPVSEFECCDWKIGVLRELGNKAQKRVHALNRDLPPPNEQFILDFEKIQSQFPDQDQLRSVTESILILLVGQCSGHGPRSDFLLFVLQSLSSIGYINWDTFLQSLLSSVSSAEVQGQLNQAMPTVSSSSLSQSGILPPPGTIANTSNFQSSNPASPLPSVHPIGSPAQSIIEPLSCATLSPVKLSDISSTGQQSKLRGTPSVRNNDISSLRQLCCRIILAGLEASLKPTTYTEIFHHMLNWLVNWDQRQQGVDESDMLKSWRPDKALSAWLHSCLDVIWLLVDEGKCRVPFYELLRSDLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTPRILNQTTPNISGDAVAQLRLSPITYLSVLGEPLHGEDIASFIQKGSLDWERAVRCIRHALRTTPSPDWWRRVLLLAACYRPPSQGPTPGAVFSSDMIFLAVFWSVVGDVQLYVQGDFFAGFTPKFDLGWSYDLASL
Length1062
PositionTail
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.08
Grand average of hydropathy-0.297
Instability index49.88
Isoelectric point5.74
Molecular weight119365.25
Publications
PubMed=27557478

Function

Annotated function 
GO - Cellular Component
cytoplasm	GO:0005737	IEA:InterPro

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
DNA binding	GO:0003677	IEA:UniProtKB-KW
lysine-tRNA ligase activity	GO:0004824	IEA:UniProtKB-EC

GO - Biological Process
lysyl-tRNA aminoacylation	GO:0006430	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24548
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.01|      18|      18|     757|     774|       1
---------------------------------------------------------------------------
  757-  774 (31.66/21.74)	SCATLSP.VKLSDISSTGQ
  776-  794 (27.36/17.68)	SKLRGTPsVRNNDISSLRQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.74|      16|      16|     706|     721|       2
---------------------------------------------------------------------------
  706-  721 (28.25/17.66)	TVSSSSLSQSG..ILPPP
  723-  740 (23.48/13.34)	TIANTSNFQSSnpASPLP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     247.25|      86|     286|     153|     290|       3
---------------------------------------------------------------------------
   87-  183 (128.77/109.16)	KGLDPYAyewDKTHSATQLQDIYR....DL.GNGEESNSENDHVSVAGRIvaRRAFGKL....................AFLTLRDDSGTiqlY......CEKERLIGDQFEDLkahVDIGDILGARG
  205-  323 (118.48/106.27)	KSLLPLP...DKYHGLTDIDKRYRqryvDMiANPEVADVFRKRAKVVSEI..RKTMDSLdfvevetpvlqgaaggaearPFVTYHNSLGR.dlYlriateLHLKRMLVGGFEKV...YEIGRIFRNEG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.26|      11|      16|      13|      23|       4
---------------------------------------------------------------------------
   13-   23 (21.25/14.51)	PLRLLFRHSSS
   30-   40 (20.01/13.15)	PRTLLIRSSSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.35|      12|      18|      43|      54|       5
---------------------------------------------------------------------------
   43-   54 (21.29/14.60)	TTSSADKPAARA
   64-   75 (21.06/14.36)	TTSTSDREAIRA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.29|      16|      16|     656|     671|       8
---------------------------------------------------------------------------
  656-  671 (29.25/14.90)	S.GHGPRSDFLLFVLQS
  674-  690 (25.05/11.85)	SiGYINWDTFLQSLLSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     290.66|      91|     536|     335|     427|       9
---------------------------------------------------------------------------
  335-  427 (145.28/110.96)	IEMYE.AYSDYQSMMNL.SEEIVTRCALAINGK...LTIDYQGVEICLERPwRRETMHNLVKEASGIDfNDLGNDLEGAKKTTLSTLGKDLDNKDKAS
  871-  966 (145.39/99.97)	VPFYElLRSDLQFIENIpDDEALFTLILEIHRRrdmMAMHMQMLDQHLHCP.TFGTPRILNQTTPNIS.GDAVAQLRLSPITYLSVLGEPLHGEDIAS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24548 with Med23 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GRLEDQIRQHEKKRAEAASRTSDKKEGTENEDDSY
2) IRSSSSSTTTSSADKPAARASARNRRNPSTTSTSDREA
504
35
538
72










Molecular Recognition Features






MoRF SequenceStartStop




NANANA