<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24548

Description Uncharacterized protein
SequenceMEVQRVWNLTSYPLRLLFRHSSSYAFRQTPRTLLIRSSSSSTTTSSADKPAARASARNRRNPSTTSTSDREAIRAIRLKKVEELRSKGLDPYAYEWDKTHSATQLQDIYRDLGNGEESNSENDHVSVAGRIVARRAFGKLAFLTLRDDSGTIQLYCEKERLIGDQFEDLKAHVDIGDILGARGSIKRTEKGELSVCVLSFAILTKSLLPLPDKYHGLTDIDKRYRQRYVDMIANPEVADVFRKRAKVVSEIRKTMDSLDFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYQSMMNLSEEIVTRCALAINGKLTIDYQGVEICLERPWRRETMHNLVKEASGIDFNDLGNDLEGAKKTTLSTLGKDLDNKDKASIEACQSVGHLLNEVFEIFVEPKLIQPTFVLDYPVEISPLAKLHRRSAGLTERFELFICGRELGNAFSELTDPIDQRGRLEDQIRQHEKKRAEAASRTSDKKEGTENEDDSYEVTLDDDFLTALEYGMPPASGMGLGIDRLVMLLTNSPSIRDVIAFPVSEFECCDWKIGVLRELGNKAQKRVHALNRDLPPPNEQFILDFEKIQSQFPDQDQLRSVTESILILLVGQCSGHGPRSDFLLFVLQSLSSIGYINWDTFLQSLLSSVSSAEVQGQLNQAMPTVSSSSLSQSGILPPPGTIANTSNFQSSNPASPLPSVHPIGSPAQSIIEPLSCATLSPVKLSDISSTGQQSKLRGTPSVRNNDISSLRQLCCRIILAGLEASLKPTTYTEIFHHMLNWLVNWDQRQQGVDESDMLKSWRPDKALSAWLHSCLDVIWLLVDEGKCRVPFYELLRSDLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTPRILNQTTPNISGDAVAQLRLSPITYLSVLGEPLHGEDIASFIQKGSLDWERAVRCIRHALRTTPSPDWWRRVLLLAACYRPPSQGPTPGAVFSSDMIFLAVFWSVVGDVQLYVQGDFFAGFTPKFDLGWSYDLASL
Length1062
PositionTail
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.08
Grand average of hydropathy-0.297
Instability index49.88
Isoelectric point5.74
Molecular weight119365.25
Publications
PubMed=27557478

Function

Annotated function 
GO - Cellular Component
cytoplasm	GO:0005737	IEA:InterPro

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
DNA binding	GO:0003677	IEA:UniProtKB-KW
lysine-tRNA ligase activity	GO:0004824	IEA:UniProtKB-EC

GO - Biological Process
lysyl-tRNA aminoacylation	GO:0006430	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24548
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.01|      18|      18|     757|     774|       1
---------------------------------------------------------------------------
  757-  774 (31.66/21.74)	SCATLSP.VKLSDISSTGQ
  776-  794 (27.36/17.68)	SKLRGTPsVRNNDISSLRQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.74|      16|      16|     706|     721|       2
---------------------------------------------------------------------------
  706-  721 (28.25/17.66)	TVSSSSLSQSG..ILPPP
  723-  740 (23.48/13.34)	TIANTSNFQSSnpASPLP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     247.25|      86|     286|     153|     290|       3
---------------------------------------------------------------------------
   87-  183 (128.77/109.16)	KGLDPYAyewDKTHSATQLQDIYR....DL.GNGEESNSENDHVSVAGRIvaRRAFGKL....................AFLTLRDDSGTiqlY......CEKERLIGDQFEDLkahVDIGDILGARG
  205-  323 (118.48/106.27)	KSLLPLP...DKYHGLTDIDKRYRqryvDMiANPEVADVFRKRAKVVSEI..RKTMDSLdfvevetpvlqgaaggaearPFVTYHNSLGR.dlYlriateLHLKRMLVGGFEKV...YEIGRIFRNEG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.26|      11|      16|      13|      23|       4
---------------------------------------------------------------------------
   13-   23 (21.25/14.51)	PLRLLFRHSSS
   30-   40 (20.01/13.15)	PRTLLIRSSSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.35|      12|      18|      43|      54|       5
---------------------------------------------------------------------------
   43-   54 (21.29/14.60)	TTSSADKPAARA
   64-   75 (21.06/14.36)	TTSTSDREAIRA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.29|      16|      16|     656|     671|       8
---------------------------------------------------------------------------
  656-  671 (29.25/14.90)	S.GHGPRSDFLLFVLQS
  674-  690 (25.05/11.85)	SiGYINWDTFLQSLLSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     290.66|      91|     536|     335|     427|       9
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  335-  427 (145.28/110.96)	IEMYE.AYSDYQSMMNL.SEEIVTRCALAINGK...LTIDYQGVEICLERPwRRETMHNLVKEASGIDfNDLGNDLEGAKKTTLSTLGKDLDNKDKAS
  871-  966 (145.39/99.97)	VPFYElLRSDLQFIENIpDDEALFTLILEIHRRrdmMAMHMQMLDQHLHCP.TFGTPRILNQTTPNIS.GDAVAQLRLSPITYLSVLGEPLHGEDIAS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24548 with Med23 domain of Kingdom Viridiplantae
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