<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24547

Description Uncharacterized protein
SequenceMDYMNMDDRSIGMFWVVSYTMAQPACETVINWLTSAGVVDLIPGTNLQSAERLVATREVSPLPMSLLSGFAMNLCTKLSYQMEDSLFSGQVVPSIAMVETYTRLLLISPHSLFRSHFHHLVQRSPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISALKGKRGDHRAFRLAENLCLNLIFSLRDFFLVKREGKGPTEFTETLNRATVITLAILIKTRGIADADHLLYLQNMLEQIMGTSQHTWSEKTLRYFPSVLRDALSGRMDNRSLAIQAWQQAETTVIHQCTQLLSPSADPSYVMTYISHSFPQHRQYLCAGALILMHGHAEKINSGNLGRVLREISPEEVTSNIYTMVDVLLHHIQVELQQGHSLQDLLLKACASLVFFVWTNELLPLDILLLALIDRDDDPHALRIVISLLDRQELQQRVKLFCMTRGHPEHWLYSGVFKRVELQKALGNHLSWKDRYNASSGAITTKFAFTGTTCNKLSRYPVFFDDIAARLLPVIPLIVYRLIENDAMDPAERILAMYSPLLAYYPLRFTFVRDILAYFYGHLPGKLIVRILNVLDISKIPFSESFPQQISSSNPVMCPPLDYFMTLLLGIVNNVIPPLHNNSKSGPTGDTSSNAQNTSQNKPPTVSQSGPANASEGRKAFYQIQDPGTYTQLVLETAVVEILSLPVSASQIVQSLVQIVVNIQPTLIQSSNAFQGCSNGVGQGSALPTSPSGGSTDSLGASRSTPSVSGINTSNFASRSGYTCQQLSCLLIQACGLLLAQLPSDFHLQLYLETTRIIKENWWLTDMKRSLAEIDSAVGYALLDPTWAAQDNTSTAIGNVVALLHSFFSNLPQEWLEGTHVIIKQLRPVTSVAMLRIAFRIMGPVLPKLANAHALFNKTLALLLSILVDAFGKNSQTPIAVNASEIRDLIDFLHHVVHYEGQGGSVQASSKPRPDVLALIGRASESLRPDVQHLLSHLKPDVNSSIYAASHPKIVQNTT
Length997
PositionTail
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.08
Grand average of hydropathy0.061
Instability index42.57
Isoelectric point7.91
Molecular weight110668.43
Publications
PubMed=27557478

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24547
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.25|      34|     109|     388|     422|       1
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  388-  422 (57.87/47.17)	CASL....VFF.VWTNELLPLDILL.lALIDRDDDPHALRI
  492-  532 (46.38/32.09)	CNKLsrypVFFdDIAARLLPVIPLIvyRLIENDAMDPAERI
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.61|      15|     109|      70|      84|       2
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   70-   84 (28.53/18.85)	FAMNLCTKLSYQMED
  181-  195 (26.08/16.60)	LAENLCLNLIFSLRD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     265.19|      82|     109|     566|     648|       3
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  566-  648 (136.82/101.20)	IVRILNvLDISKIPFSESFPQQISSSNPVMCPPLDYFMTLLLGIVN.NVIPPLHNNSKSGPTGDTSSNAQNTSQNKPPTVSQSG
  677-  759 (128.38/90.14)	VVEILS.LPVSASQIVQSLVQIVVNIQPTLIQSSNAFQGCSNGVGQgSALPTSPSGGSTDSLGASRSTPSVSGINTSNFASRSG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     163.52|      61|     563|     206|     381|       4
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  245-  283 (51.14/219.82)	QIMG......TSQHTWSEKTLRYFPSVLRDALsGRMDNRSLAIQA...................................................................................................
  357-  381 (15.34/46.26)	.............................................wqqaettvihqctqllspsadpsyvmtyishsfpqhrqylcagalilmhghaekinsgnlgrvlreispeevtSNIYTMVDvLLHH.IQVElQQGHSLQ
  878-  945 (97.04/ 0.00)	RIMGpvlpklANAHALFNKTLALLLSILVDAF.GKNSQTPIAVNA.........................................................................SEIRDLID.FLHHvVHYE.GQGGSVQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24547 with Med23 domain of Kingdom Viridiplantae
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