<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24528

Description Uncharacterized protein
SequenceMAHSWARGSLIVLAIISFGCLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDGERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQKDMKLVPYKIVNKDGKPYIQVKIKDGETKVFSPEEISAVILTKMKETAEAFLGKKINDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDHRIMDYFIKLIKKKHGKDISKDNRALGKLRRESERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDYFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKAEKITITNEKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNALETYIYNMKNQIGDKDKLADKLESDEKEKIETAVKEALEWLDDNQSVEKEEFEEKLKEVEAVCNPIVTAVYQRSGGAPGGGADASAEDDDDSHDEL
Length668
PositionUnknown
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.06
Grand average of hydropathy-0.420
Instability index27.85
Isoelectric point5.10
Molecular weight73431.31
Publications
PubMed=27557478

Function

Annotated function 
GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24528
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     154.72|      44|     244|     378|     423|       1
---------------------------------------------------------------------------
  102-  144 (49.17/29.44)	KRLIGRKFEDKEvqkdmklvPYKIVNKDGKPYIQVKIKDG........ETK..
  203-  226 (31.47/17.70)	......................RIINEPTA....AAIAYG.LDKKGGE..KNI
  378-  422 (74.08/55.97)	QQLLKDYFEGKE........PNKGVNPDEAVAYGAAVQGGiLSGEGGDETKDI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.78|      29|     260|     229|     257|       3
---------------------------------------------------------------------------
  229-  257 (52.22/32.11)	FDLGG......GTFDVSI.LTID.NGVFEVLSTNGDT
  490-  526 (34.56/18.88)	FDLSGippaprGTPQIEVtFEVDaNGILNVKAEDKGT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.18|      18|      21|      37|      55|       4
---------------------------------------------------------------------------
   37-   55 (29.36/19.52)	VIGIDLGT..TYSCVGvYKNG
   59-   78 (28.82/14.93)	IIANDQGNriTPSWVG.FTDG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.70|      31|      34|     573|     606|       6
---------------------------------------------------------------------------
  573-  606 (42.78/34.85)	LEtYIYNmkNQIGDKDKLADKLESDEK..EKIETAV
  610-  642 (45.92/26.44)	LE.WLDD..NQSVEKEEFEEKLKEVEAvcNPIVTAV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24528 with Med37 domain of Kingdom Viridiplantae
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