<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24523

Description Uncharacterized protein
SequenceMGSVGAAAMDDTVYVAVGNNVNKTKQLLYWTIHTFSARPICLLHVHQPYSTNSFTDRNLSAIEPSDHAIKAFQEQGSKQVHELLDQYIFILKKLKVKAKVLLIDKDDIEKGIAEAIAQHNIRWLVMGEAADKSNSGELVEQESEKAIIVREQAFLSCNIWLICKGEPTRTRVDGEHTSEVETAPQLSVLNSKTEAIQSEMINSELNPNALKYSDSGDTEETGNVSSQCSLQSKWSLSSFVRRSKLTDFLFHEDKELESLCAKEISRRKEVEEQIVRVKQQVQEMKNQQDEIMHELQMVQDRKSTLKNQLSESQCTVTELEEKIISAVDLLISFREKRDMLRIEHKNAVRKVKVLKEFREADTRLSYRVEFPAFSFIEINEATNDLDPSWKIGEGRYGSVYKGLLCNMHVAIKMLPSYGSQSQLEFQHQVEILSRVRHPNLLTPIGSCVESRSLVYEYLNNGSLESHLVRKDKTSLPWQIRVSIAANICSALIFLHCNDPCIIHGNLKPSKVLLDANFVAKLSDVGIPSLFQCSVDSAVTTTACRNKNESMAYVDPEYLVTSKLTPESDVYSFGVILLQLLTGRPLFGLVRDMKCALEKDNLKSVLDFSAGEWPLYQTKQLACLALRCCEKTWLNRPDLVSEIWSVLEPFRTTCINMPPYLASKKPHHPPPPHFLCPIVQEVMEEPYIAADGYTYEAEAIKEWLNSGHNTSPMTNLKLEHTDLVPNYVLHNAIQEWQQLI
Length739
PositionTail
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.07
Grand average of hydropathy-0.304
Instability index40.47
Isoelectric point5.82
Molecular weight83845.95
Publications
PubMed=27557478

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24523
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     148.76|      51|      85|     226|     282|       1
---------------------------------------------------------------------------
  226-  282 (79.70/70.09)	SQCSL.QSKWSLSSFVrrskltDFL..FHEDKELESLCAKEISRR....KEVEEQIVRVKQQVQ
  312-  369 (69.06/48.19)	SQCTVtELEEKIISAV......DLLisFREKRDMLRIEHKNAVRKvkvlKEFREADTRLSYRVE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.42|      25|     339|     154|     186|       2
---------------------------------------------------------------------------
  120-  145 (39.02/26.28)	NIrWLV.MGEAADKSNSGEL...VEQESEK
  158-  186 (36.40/32.93)	NI.WLIcKGEPTRTRVDGEHtseVETAPQL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.38|      10|      28|     584|     594|       7
---------------------------------------------------------------------------
  584-  594 (15.44/15.90)	PLFGlVRDMKC
  613-  622 (18.94/13.22)	PLYQ.TKQLAC
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24523 with Med32 domain of Kingdom Viridiplantae
Unable to open file!