<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24515

Description Uncharacterized protein
SequenceMASSETPSPSPSTPNTSAPSAPFSYNNNMPQNVINTSHHSSTYSNMSDSVAQDVSKVSSASSIPNSVPPHSSNPTMRPTYDPNYRPPTSWMPSAPSFPMHHVIPGTPGNPAPPGLTPALVISSNLSAPSTSSDSSSAAVPRQNMPNAAIASDPTLQQKGTPYPSIPVMAASPQGLWLPPPQISGVLRPPFLPYPAAFPGPFPFPARGVTLPAVPVPDSQPPGVTPMTAAGVTSASPASSHQLRGTTGFQTEVIPGHADYKKILNVAQNEDPANDHLDAWTAHKTEAGIVYYYNASTGESTYDKPAGFKGEPHQVAVQPTPVSMVNLPGTDWVLVSTSDGKKYYYNNRTKTSCWQIPNEVAELKKKQDGDVTKDHLMSVPNTNVLSDKGPGMVTLNAPAINTGGRDAAALKPSSVQSSSSALDLIKKKLQDSGTPVTSSSIPNSSVGSESNGSKAAESTAKGLQIDNNKDKQKDTNGDANVSDTSSDSEDEDSGPSKEECILQFKEMLKERGVAPFSKWDKELPKIVFDPRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKKLLDEALEDINHNTDYQTFREKWGDDPRFKALDRKEREHLLSERVLPLKKAAEEKAQAMREAATSSFKSLIKEKGDITFNSRWSRVKESLRDDPRYKSVRHEDREILFNEYISELKAAEHAAERETRAKREEQEKLRERERELRKRKEREEHEMERVRLKIRRKEAVASFQALLVETIKDPLASWTESKSKLEKDPQGRANNPELGPADMEKLFRDHIKMLQERRVNEFRVLLAEVLTIEAASRETEDGKTVLNSWSTAKRVLKSDPRYNKVPREERETLWHRYAEDVLRRQKSSHDPREEKHTDSKGRDAKARNPHESG
Length891
PositionUnknown
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.06
Grand average of hydropathy-0.866
Instability index53.78
Isoelectric point8.48
Molecular weight98768.07
Publications
PubMed=27557478

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24515
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     455.50|      65|      65|     560|     624|       1
---------------------------------------------------------------------------
  453-  516 (69.31/42.04)	KAAE....STAKGLQIDNNKDKQ.KDTN..GD.ANvSDT.SSDSEDEDSG.......PSKEECI....LQFK..E....MLKERgVAPFS
  517-  551 (40.05/20.78)	K......................wDKEL..PK.IV.F.....................DPRFKA....IPSYSAR...RSLFEH.YVKTR
  552-  620 (99.52/64.00)	AEEErkekRAAQKAAIEGFKKLL.DEAL..ED.IN.HNT.DYQTFREKWG.......DDPRFKA....LDRKERE...HLLSER.VLPLK
  621-  687 (89.69/56.85)	KAAE.ekaQAMREAATSSFKSLI.KEK...GD.IT.FNS.RWSRVKESLR.......DDPRYKS....VRHEDRE...ILFNEY.ISELK
  691-  722 (43.69/23.43)	HAAE....RET.RA.....KR...................EEQ...EKLR.......ERER.EL....RKRKERE..............E
  723-  793 (68.32/41.33)	HEMErvrlKIRRKEAVASFQALL.VETI..KDpLA.SWT.ES...KSKLE.......KDPQGRAnnpeLGPADME...KLFRDH.IKMLQ
  797-  863 (44.92/24.32)	...............VNEFRVLL.AEVLtiEA.AS.RETeDGKTVLNSWStakrvlkSDPRYNK....VPREEREtlwHRYAED.VLRRQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     392.77|      61|      61|     112|     172|       2
---------------------------------------------------------------------------
    3-   44 (26.26/ 7.06)	.......................SSETP...SPSPSTPNTSApSAPfsyNN.NMPQ.....NVINT....SHHS.ST.Y.....S..........
   45-   95 (45.85/18.66)	.........................NMSdsvAQDVSKVSSAS.SIP...NS.VPPH........SSNPTMRPTY.DPnY....rPPTSW.MPSAP
  112-  172 (104.92/53.67)	PPGLT.............PALVISSNLS...APSTSSDSSSA.AVP...RQ.NMPN.....AAIASDPTLQQKG.TP.Y.....PSIPV.MAASP
  178-  236 (67.21/31.33)	PP................PQ..ISGVLR...PPFLP...YPA.AFP...GPfPFPArgvtlPAVPV.PDSQPPGvTP.M.....TAAGV.TSASP
  253-  327 (59.46/26.73)	IPGHAdykkilnvaqnedPA...NDHLD...A.WTAHKTEAG.IVY...YY.NAST.....GESTYDKPAGFKG.EP.HqvavqPT.PVsMVNLP
  346-  394 (51.38/21.95)	NRTKT.............SCWQIPNEVA...ELKKKQDGDVT.KDH...LM.SVPN.....TNVLSD.....KG.PG.M.....VTL........
  396-  441 (37.68/13.82)	APAIN.............TGGRDAAALK....PSSVQSSSSAlDLI...KK.K................LQDSG.TP.V...tsSSIP.......
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24515 with Med35 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DSGTPVTSSSIPNSSVGSESNGSKAAESTAKGLQIDNNKDKQKDTNGDANVSDTSSDSEDEDSGPSKEECIL
2) EHAAERETRAKREEQEKLRERERELRKRKERE
3) IPNEVAELKKKQDGDVTKDHLMSVPNTNVLSDKGPGMVTLNAPAINTGGRDAAALKPSSVQS
4) LWHRYAEDVLRRQKSSHDPREEKHTDSKGRDAKARNPHESG
5) MASSETPSPSPSTPNTSAPSAPFSYNNNMPQNVINTSHHSSTYSNMSDSVAQDVSKVSSASSIPNSVPPHSSNPTMRPTYDPNYRPPTSWMPSAPSFPMHHVIPGTPGNPAPPGLTPALVISSNLSAPSTSSDSSSAAVPRQNMPNAAIASDPTLQQKGTPYPSIPVMAA
6) VTLPAVPVPDSQPPGVTPMTAAGVTSASPASSHQLRGTTGFQT
7) WTESKSKLEKDPQGRANNPELGPADMEKLF
430
690
355
851
1
208
756
501
721
416
891
170
250
785










Molecular Recognition Features






MoRF SequenceStartStop




NANANA