<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24512

Description Uncharacterized protein
SequenceMMELLLNPSQSHPHLHHDEHNSMEGKCAEKVHVAVGKSVQKATTLLQWCLTHFKNTHICLIHVYQPSPLIPTLLGKFPASKANPGVVSAFRKEEKEQIMKLLDKYLSICLEAKVKASIAVVEADQVQKGIVDLVNGHNIRKLVIGAIPENFMNVKRNSSKATYAVKNTPSFCEIWFIYKGKHVWTREACESPHSLSSCAQPEVTTAESLSSRSVQYGMNELSHSECLQSHSERSTICNGIGSLIQSEIIETEATFPSKSSSSSRHCSSQSSVARSVDSLSEVEEERVNCKVVEAKREADTATEKAFVELLKRKRLEIIAIEAIRKVNLFESAHAREAMLKKETEDALRATIQDQQKCLGENKEIASELQRAMRSIALLDSCAQETNRRRDEAADELSLIQASILTLWHEKQQIRRQKMEASRWLERWKSRDQVEVTHCNHVIGFAEELPELAEFSLSDLQNATCNFSESFKMREGGYGCIYKGEMLGRTVAIRKLHRHNLQGPAQFHQEVQVLGSLQHPHLLTLLGFCPEACSLVYEYLPNGNLQDHLFRKNSVSPLTWNTRARWIAEIARAFCFLHSSKPETIIHGDLKLETVLLDSALSCKICEFGFSRLVTQEAIYPSSFRLNTETKGSFTYTDPEFCRTGVLTPKSDIYSFGLIILQLLTGRTPVGLASEVRRATSCGKLSSVLDSSAGEWPLAVVSRLVELGLECCQQNRKDRPEITPTLVRELEQLHVSEERPVPPFFLCPILQEIMHDPQVAADGSTYEGKAISEWLKNGHETSPMTNLKLSHLHLTPNHALRLAIQGWLCKS
Length810
PositionTail
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.06
Grand average of hydropathy-0.308
Instability index53.49
Isoelectric point6.91
Molecular weight91020.12
Publications
PubMed=27557478

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24512
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     482.51|     120|     450|     160|     286|       1
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  160-  286 (194.74/124.19)	KATYavkntPSFCEIWFIYKGKHVWTR..EACE....S..PHS.LSSCAQ..PEVTTAESLSSRSVQYGMNELSHseCLQSHS.ERSTICNGIGSLIQSEIIETEATFPSKSSSSSRHCSSQS.........SVARSVDSLSEVEEER
  479-  583 (142.84/78.00)	............C....IYKGEMLGRT..VAIR....KlhRHN.LQGPAQfhQEVQVLGSLQHPHL...LTLLGF..CPEACSlVYEYLPNG..NL.QDHLFRKNSVSPLTWNTRARWI...A.........EIARAFCFLHSSKPET
  616-  738 (144.92/80.47)	EAIY.....PSSFRLNTETKGSFTYT.dpEFCRtgvlT..PKSdIYSFG.....LIILQLLTGRT.PVG.........LASEV.RRATSCGKLSSVLDSSAGEWPLAVVSRLVELGLECCQQNrkdrpeitpTLVRELEQL.HVSEER
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      83.28|      26|      47|     322|     347|       3
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  322-  347 (40.95/29.38)	AIRKVNLFESAHAREAMLKKETEDAL
  371-  396 (42.33/30.63)	AMRSIALLDSCAQETNRRRDEAADEL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24512 with Med32 domain of Kingdom Viridiplantae
Unable to open file!