<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24508

Description Uncharacterized protein
SequenceMPSQSHLHSLYDSHFNYMLHMLYLAQNRYFEDEGFTEYLKYLQYWQHPEYIKFIMYPHSLYFLELFQNANFCNAMAHPNNKELTHRQQFYFWKNYRNNRLKHLLPRSLPKTSATPTPSAPISTSNQMPLPALPPVPTTNVTMTTSSTRAPSPMPYRIPPGSTIPKNEMRNSAVEKMTENGDHSDLDKTANIMSDIICPVLLETVVKDVILDKAAVKQSGDAWRIVHDSCLPILHLIDTRRSIPYAIKQIQELLGISCTFAQAIQRLATSVKMVAKGLLREHLILLASSMTCGGNLVGFNTGGYKALARQLNIQVPFTDATLFTPRKCFERAAEKFHTDSLSSVVASCSWGKHVAVGTGSKFDVVWNAKEIKSSENRGMDVYNFLYMVKDFTSGEEEKNACLGEDIDDLLEDENMDWGMSPQHTSGFDDAVFEENCELPNGSTSNGWDINGNKNETKSNDWSGWGSNKAEGVSENAKEDSWSSGKQKTDVVKEDSSRSNAWDANTKKTDTKSNDWLAWGGNKSETQDGSSDRAQEDSWSSGQRKANVTQEDPKSGSWDADTNQTKTKSNDWTAWGGKKSEIQDVGFKRAEEDSWSCGNKKANVAQEDSSKPGAWDANTNQTKTKSKDSLDWGGKKSEIQDGGSGRVQEDSWNSGQRKASVIQDDSSKPGAWDAKANQAKTPSNEWSGWGGKKSEVQGGGFDRSQEDSGSSWKWNAESKVGSKVIQEEASKSNAWDANTDQKKTKSNDWSAWGRSKSEIQDSGSERAQEDSWGSAKLKAESNVGADVRQKDSSRSNAWESNFNKSSENPAWGSQNESNQAASSQGWDSQIASANSGPDKNFQWGKPKSAESQSWDPKNESNQAASSQGWDSQVASANSDSDKSFQWGKQGRESFKKNRFEGSQGRGSNAGDWRNMNRPPRPPPPMYTPEEQEVRKDIDSIMQSIRRIMQQEGYNDGDPLAAEDQAFVLENVFEHHPDKETKMGDGIDYVMVSRHSNFQESRCMYVVLKNGKKEDFSYRKCLENLVRKKYPDVAESFNDKHFRKPRGRAGGDQAPTTPLRTSTETNQAPRTPWPTSTETNQTPKSSWPTSTETNQAATSSWPTSTETNQAPTSSWPTSTETNQAPTATWPTSSEGNE
Length1134
PositionMiddle
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.09
Grand average of hydropathy-1.008
Instability index45.13
Isoelectric point5.74
Molecular weight126534.06
Publications
PubMed=27557478

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription, DNA-templated	GO:0006355	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24508
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            12|     477.84|      41|      41|     802|     842|       1
---------------------------------------------------------------------------
  439-  469 (33.79/ 8.61)	NGSTS..N..GWDI....................NGNKN..etK..S..NDWSGWGS....N.KAE
  473-  506 (35.58/ 9.42)	ENAKE..D..SWS.........SGKQ.......KT.DVV....KedS..SRSNAWDA....N.TKK
  507-  529 (29.34/ 6.60)	TDTKS..N..DW.......................LAWG...gN..K..SE.....T...QD.GSS
  530-  561 (28.64/ 6.29)	DRAQE..D..SWSSGQ..RKAN.........................vtQEDPKSGS...WDaDTN
  604-  650 (42.78/12.67)	QEDSS..KpgAWDANT..NQTKTKSK.......DSLDWG...gK..K..SEIQDGGSgrvQE.DSW
  661-  704 (46.52/14.36)	QDDSSkpG..AWDAKA..NQAKTPSN.......EWSGWG...gK..K..SEVQGGGF...DR.SQE
  705-  739 (35.74/ 9.50)	DSGSS..W..KWN.....AESKVG.S.......KVIQ.....eE..A..SKSNAWDA....N.TDQ
  740-  762 (29.81/ 6.82)	KKTKS..N..DWSA.......................WG....R..S.kSE.....I...QD.SGS
  763-  816 (45.59/13.94)	ERAQE..D..SWGSAKlkAESNVGADvrqkdssRSNAWEsnfnK..S..SENPAWGS...QN.ESN
  817-  859 (66.49/23.38)	QAASS..Q..GWDSQI..ASANSGPD.......KNFQWG..kpK..S..AESQSWDP...KN.ESN
  860-  905 (51.38/16.56)	QAASS..Q..GWDSQV..ASANSDSD.......KSFQWGkqgrE..S.fKKNRFEGS...QG.RGS
 1092- 1117 (32.17/ 7.88)	QAATS.....SWPT.....STETNQA.......PTSSWP....T..S..TE...............
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     138.08|      26|      26|     111|     136|       2
---------------------------------------------------------------------------
  100-  126 (26.77/ 8.53)	..LKHLLPrsLP...kTSATPTPSAPISTSNQ
  127-  150 (36.95/14.11)	MPLPALPP..VP...tTNVTMTTS...STRAP
  151-  175 (38.31/14.85)	SPMPYRIP...P....GSTIPKNEMRNSAVEK
 1062- 1088 (36.04/13.61)	TNQAPRTP..WPtsteTNQTPKSSWPTST...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.63|      18|      19|      12|      29|       3
---------------------------------------------------------------------------
   12-   29 (34.67/20.05)	DSHF.NYMLHMLYLAQNRY
   32-   50 (31.96/17.97)	DEGFtEYLKYLQYWQHPEY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      89.75|      19|      19|     977|     995|       4
---------------------------------------------------------------------------
  928-  947 (23.03/14.25)	EQEVRKDID........SIMQ..SiRRIMQ
  948-  970 (15.83/ 7.34)	QEGYNDG.DplaaedqaFVL......ENVF
  977-  995 (33.25/24.05)	ETKMGDGID........YVMV..S.RHSNF
  997- 1013 (17.64/ 9.08)	ESRCM............YVVLknG.KKEDF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.38|      14|      19|     361|     375|       5
---------------------------------------------------------------------------
  361-  375 (21.31/17.06)	FDvVWN....AKEIKSSEN
  378-  395 (20.08/10.63)	MD.VYNflymVKDFTSGEE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.47|      15|      19|     566|     580|       6
---------------------------------------------------------------------------
  566-  580 (28.67/15.26)	KSNDWTAW..GGKKSEI
  586-  602 (21.80/ 9.59)	KRAEEDSWscGNKKANV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.36|      10|      18|     406|     415|       7
---------------------------------------------------------------------------
  406-  415 (17.78/10.19)	DDLLEDENMD
  427-  436 (18.57/10.95)	DDAVFEENCE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      32.54|      11|      17|     266|     278|       8
---------------------------------------------------------------------------
  266-  278 (13.44/14.06)	LATSvkMVAKGLL
  285-  295 (19.10/11.79)	LASS..MTCGGNL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.97|      15|      15|      67|      81|       9
---------------------------------------------------------------------------
   67-   81 (27.97/18.47)	QNANFCNAMAHPNNK
   85-   99 (30.00/20.41)	HRQQFYFWKNYRNNR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24508 with Med31 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) LPNGSTSNGWDINGNKNETKSNDWSGWGSNKAEGVSENAKEDSWSSGKQKTDVVKEDSSRSNAWDANTKKTDTKSNDWLAWGGNKSETQDGSSDRAQEDSWSSGQRKANVTQEDPKSGSWDADTNQTKTKSNDWTAWGGKKSEIQDVGFKRAEEDSWSCGNKKANVAQEDSSKPGAWDANTNQTKTKSKDSLDWGGKKSEIQDGGSGRVQEDSWNSGQRKASVIQDDSSKPGAWDAKANQAKTPSNEWSGWGGKKSEVQGGGFDRSQEDSGSSWKWNAESKVGSKVIQEEASKSNAWDANTDQKKTKSNDWSAWGRSKSEIQDSGSERAQEDSWGSAKLKAESNVGADVRQKDSSRSNAWESNFNKSSENPAWGSQNESNQAASSQGWDSQIASANSGPDKNFQWGKPKSAESQSWDPKNESNQAASSQGWDSQVASANSDSDKSFQWGKQGRESFKKNRFEGSQGRGSNAGDWRNMNRPPRPPPPMYTPEEQEVRKDIDSIMQSIRRIMQQEGYNDGDPLA
2) TSATPTPSAPISTSNQMPLPALPPVPTTNVTMTTSSTRAPSPMPYRIPPGSTIPKNEMRNSAVEKMTENGDHSD
3) VAESFNDKHFRKPRGRAGGDQAPTTPLRTSTETNQAPRTPWPTSTETNQTPKSSWPTSTETNQAATSSWPTSTETNQAPTSSWPTSTETNQAPTATWPTSSEGNE
437
111
1030
958
184
1134










Molecular Recognition Features






MoRF SequenceStartStop




1) AWDAKANQAK
2) FQWGKQ
3) KNFQWGK
4) MYTPEEQEV
5) SFKKNRF
6) WKWNAESKVGSKVIQ
7) WRNMNR
669
882
837
923
891
710
910
678
887
843
931
897
724
915