<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24500

Description Uncharacterized protein
SequenceMKSIDHVLHLSHNEPEPEPEAAEAEAGVVLVQFLFSILSQLLEATLHDEGLLNHHHMDHMDMDNNNNNIIITEEKEEKDDNKTENTEESHRANTAMAIEIIAHFLQNKITSKILSLHHRNMPSKWGSFIQQLQILASKSLVLRNLKHITPEALLLSTQNIISHESRPPKSKLDSNGLIAAGQSYGDPCSSLWLPFDIILEEAMAPGQVSAFSAVDILAGLVKSLHAVNGSTWHNAFLALWVAALRLVLRGRDSNEAPFCIDTRLCMLLCITVLAVTKVIDEEEGELIEEAEHSRTNQRRDKQRRREMVTSLQLLGDYECLLAPPQSVVLEANQAAAKAIMFLSGNPVCNINDLPMKCSGNFRHLIVEACIARNLLDTSAYTWPGYVNACNNQIPCSISSQVPGWSSLMKGLQLTPELVNVLVSTPASSLAEIEKIYEIAIKGSDEEKIYAATILCGSSLVRGWNVQEHTVLFIIKLLSPTVPPNYSGTKSHLISQAPLLNVLLVGISSSDCIHIFSLHGLVPLLAGGLMLICEVFGSCVSDASQTLATGEELSYLEVFSNAFTLLLRFWRFDLPSHEHLRRDGGPPFGSLICPEYLLTVRNSKLESCGRSAKDKLKIKRQSKIISFSKESVFMHSFPKLNFWYRQHQECIASIRSGLVPGGPVHQIVDALLNIMFRKINKGAEPLTSMPLGSSSSSGSDMDDDALVKLKVPAWDILNVIPFVLDASLTACAHGRLSTRQLATGLKALADFLPASLVTIASYFSAEVTRGVWKPAFMNGTDWPSPAANLSLVEQQIKKILAATGVDVPSLVVDGDSPATLPLPLAAFVSLTITYKLDKASERLLKLISPAMSALASSCPWPCMPIVTSLWVQKVKRWSNYLVFLTSGTVFHHNRDAVVQLLRSCFTSTLGLGSASASIYNNSGVSALLGHGFGCKTPGGVSPVAPGILYLKVYRSIGDISFLTEEILSILMLSVRDIASSELPKAKGDVKKTKHGMKNGQVSLARSMQHVKHAAILGASLLWISGGPKLVQSLMKETLPSWLLSTNMLEMDGGESGVLVAMHRGYALAYFAILSGTFAWGIDNSFICSKRRAKVLSRHVKFLASTLDKEISLRCHCATWRAYVTGFVSLMVACTPLWVPEVDADILKRLSRGLIRLNEYELAFRLLEIGRIAVMGAAAELIIELQHTF
Length1187
PositionTail
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.07
Grand average of hydropathy0.135
Instability index49.16
Isoelectric point6.87
Molecular weight130026.28
Publications
PubMed=27557478

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24500
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     366.31|      92|     398|     463|     558|       1
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  354-  439 (91.14/56.22)	.....................PMKCSGNFRHLIVEACIARNLLDTSA.......YTWPGYVNAcnnqipcsissqvpgwssLMKGLQLTPELVNVLVSTPASSLAEIEKI.Y.EIA
  463-  558 (145.58/108.67)	WnVQ..EHTVLFIIKLLSPTVPPNYSGTKSHLISQAPLLNVLLVGISSSDcihIFSLHGLVPL..................LAGGLMLICEVFGSCVSDASQTLATGEELSYLEVF
  869-  951 (129.59/83.87)	W.VQkvKRWSNYLVFLTSGTVFHHNRDAVVQLL.RSCFTSTLGLGSASAS...IYNNSGVSAL..................LGHGFG..CKTPGG.VS....PVAPG..ILYLKV.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     151.28|      47|      51|     658|     706|       4
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  658-  706 (74.35/49.20)	VPGGPVHQIVDALLNIMFRKINKGaePLTSMPLGSSSSSGSDMDDDALV
  710-  756 (76.93/45.54)	VPAWDILNVIPFVLDASLTACAHG..RLSTRQLATGLKALADFLPASLV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     173.05|      53|     885|     103|     158|       5
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  103-  158 (80.85/56.76)	HFLQNKITSKILSLHHRNMPSKWGSFIqqLQILASKSLVLRNLKHITPeALLLSTQ
  993- 1045 (92.20/54.67)	HGMKNGQVSLARSMQHVKHAAILGASL..LWISGGPKLVQSLMKETLP.SWLLSTN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24500 with Med33 domain of Kingdom Viridiplantae
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