<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24483

Description Uncharacterized protein
SequenceMIMDNSKTTSKTTLLKLMLLRAWKERWTDCQWGINVKTILTRGVSGDVYNLADAIVQQAVVGSGANMLFLSYLKHSLCAHLISHAAVLNRIAKYDQFDKHHCLIALLDFLKSIIDGVTCRGKQEESILTKATVSLVHWLLQIYECILKSYAESLALQTEEEDVVQRVATVLERIVENPFLLGVISIGKCEDPEQFVTLQKRFNSVNNLTLTTGYVAHVSASQKSVTVTDYMRKLVLLEVDTLEMKLFDGGKVEPITFSLQPFIAIEVLLNPMCDTNQYVAQLINLKRLKGYSYARLYCEIMRGCLISLNNVEGTSKESLMCAFAFIKVPHILQQIHTKTNGQEQQDEATSTNYSVEVLEAFELLMQDGPVLDYMDMKCSCNIVECLLKEMVKHNLLTETHVKHFVALREPVTLGLHKLEANNAQLTLMLKFVFRVESPLVGILKALSTDYSKVQDALLAMLCQVLTGNSLDLVLSVASVEGKFKAFISGLLKCNDYAKQATSVEIGKASTTRGALFDVTFMILASIAQSYGSDVILAEGGNSFFEKWVRDYMVERKKSKSPMTMVKQADPMVLEELIMALNNTDGGGLKASNLRWEDICYTIPALLHQVLMAWENETLSPVEIKKMLDGLKAHFCSFAVCASSWLCAYMQMVRQDEQVKPMNMVQQLCSALTGPQAEEWQQQDYCKERFSLMGQIIRRMQQEFQRTPQINPKLRALFPSQHMVSHLPLEEQFEEAWKAIAERGWLPIETTFLLDTLLQSCGPSWLVEKLIAKLFLCKYIRDLNKTMDIIFAIMHLDIERCTIALLSQLVPMMLLNKQQTPEIVDPQSRVLAKLCVYCIIVTMEASVTASKKRTRGTVGSEMEDIDSLCTSAKLRKIELDGLSVGCEATGGNEFALESALDSAACWDVTSVPSLKEPLQGCLQTLFRTFTQYITTDELSPKVYFVFQFLSLLVESGRERIMCVLKLIPNGLVQNLLKINATDEMTVGLILRLYDLNTPSGRQFAMSDICLLRNIQMRKESIKL
Length1022
PositionTail
OrganismAnopheles funestus (African malaria mosquito)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles.
Aromaticity0.07
Grand average of hydropathy0.088
Instability index39.53
Isoelectric point6.07
Molecular weight115107.39
Publications
PubMed=21129198
PubMed=31157884

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24483
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.35|      13|      34|     570|     582|       1
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  570-  582 (22.70/12.69)	PMVLEELIMALNN
  603-  615 (24.65/14.35)	PALLHQVLMAWEN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     103.98|      33|      34|     101|     133|       2
---------------------------------------------------------------------------
  101-  133 (54.59/29.99)	HCLIALLD.FLKSIIDGVTCRGKQEESILTKATV
  137-  170 (49.39/26.56)	HWLLQIYEcILKSYAESLALQTEEEDVVQRVATV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.59|      19|      32|     816|     834|       3
---------------------------------------------------------------------------
  816-  834 (32.33/22.35)	KQQTPEIVDPQSRVLAKLC
  850-  868 (32.25/22.28)	KKRTRGTVGSEMEDIDSLC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      96.80|      28|      41|     941|     968|       4
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  941-  968 (48.18/33.54)	VYFVFQFLSLLVESGRERIMCVLKLIPN
  985- 1012 (48.62/33.91)	VGLILRLYDLNTPSGRQFAMSDICLLRN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     256.66|      85|     335|     326|     418|       5
---------------------------------------------------------------------------
  326-  418 (132.98/105.10)	IKVPHILQQIHTKTNGQE....QQDEATSTNYSV..EVLEAFELLMQDGPvldYMDMKcscniVECLL..KEMVKHNLLTETHVKHFVALRE....PV..TLGLHKL
  658-  756 (123.68/79.11)	VKPMNMVQQLCSALTGPQaeewQQQDYCKERFSLmgQIIRRMQQEFQRTP...QINPK.....LRALFpsQHMVSHLPLEEQFEEAWKAIAErgwlPIetTFLLDTL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24483 with Med24 domain of Kingdom Metazoa
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