<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24436

Description Uncharacterized protein
SequenceILWLQDLPHAVLKAMPCSCNVFIVSRHRLTIKLANQTQTDNSNTCSKIQSVSHRAFALQLRSQLQDKQSLHDLPDVNTPKSSGVSSSDSCSQARSSLSNSTSAAQSSESHRRRLFGSLCRKTPGRTGDTDFDATGQLKEFPYVSLSSTEESQRIDEVAKPRKELQDKPMMCVKACENHVQAKKKIQVLSNGCSEDLHKVQDALQWENFFKQKAAPENNKHFRAIEEAEMVKEAFTREAYSKHNAETVTNMATTEKAKVLDALLSTGKSCRRYSRHEIELATENFSDAKKIGEGGYGIVYRCILDHTEVAVKVIQQDSRGKIDEFFKEIDILSRLHHPHLVLLLGFCPEIGCLVYEYMENGSLEDQLIDNEGRQPLHWFLRFQIIFEVARGLAFLHGTKPEPIVHRDLKPGNILLDKNYVSKIGDVGFAKLISDLAPDGFTEYRDDTVIAGTMYYMDPEYQLTGTVRPKSDLFALGIIILQLLTGKRPQGLILSTEEAIRKGTFPEILDVSLNDWPIAEAEMLAKLGLHCTALRCRDRPDLEQEVLPELENVLSRVTSSWKFESPKAVVPSHFICPISQEVMDDPCVAADGHTYERRAIEAWLEEHKISPITKHMLPSLTIIPSHSLHEAIQQWKQSSR
Length638
PositionTail
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.07
Grand average of hydropathy-0.401
Instability index50.01
Isoelectric point6.27
Molecular weight71946.13
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24436
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      93.76|      30|      52|     294|     344|       1
---------------------------------------------------------------------------
  296-  326 (44.71/62.26)	G.IVYRcILDHTEVAVKVIQQDSRGKIDEFFK
  350-  380 (49.05/18.23)	GcLVYE.YMENGSLEDQLIDNEGRQPLHWFLR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.01|      19|      57|      36|      54|       2
---------------------------------------------------------------------------
   36-   54 (35.13/24.68)	QTQTDNSNTCSKIQSV.SHR
   92-  111 (27.88/18.07)	QARSSLSNSTSAAQSSeSHR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     133.55|      45|      49|     429|     476|       4
---------------------------------------------------------------------------
  385-  425 (38.54/22.44)	..........FEVARGLAFLHGT....KPEPIVHRDLKPgnilldKNYVSKIGdV
  429-  476 (70.12/56.25)	KLISDLAPDGFTEYRDDTVIAGTMyymDPEYQLTGTVRP......KSDLFALG.I
  480-  503 (24.89/11.09)	QLLTGKRPQGLILSTEEAIRKGTF...............................
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24436 with Med32 domain of Kingdom Viridiplantae
Unable to open file!