<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24404

Description Uncharacterized protein
SequenceQVLRNRAQCHIFLGALPEGPEDAEKCIELDPTYLMGYVCKAKVQALMQNYESAMATYIEGLKCDPNSTIVIDGFKRCMTCIEKSKDGDVGPEDLEDILRDWHSDIYLSNELKKYMEEVAVFKKEASDERLRRIESEQTARTSEANQVQRQKDAKEHLSKIQQELQQFKARQDEVANELQKANKHNEHAQNQLLESKKFHSEELQKANERYNQLQSKLDVLLKESETALKEVEKLRRRSTVMPCQFSLAELERATENFSTSMKFRECGVASVYRGVLWKMKVAIKVLRHDGQGRSQFEQEVAIHSRVRHPNLVTLLGACTELLTLVYEFLPNGSLEDFLSCEDKRRTLTWQIRIRIIAEICSALIFLHENRPEPIVHGDLHPANILLDANLVTKLSDFGIFHLLIQSNSNSTNHPVEAPIYVDPECLATRKMAPHSDVYSFGMVVLRLLTGKPPLGIKKIVEDAMEQGDLNSVVDTSAGEWPDVHIQQLAHIALSCTEQNSRYRPVLSGQLWTAVETMRDVAMLSSQSSSSLVQEESIIPSHFTCSISHV
Length549
PositionTail
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.06
Grand average of hydropathy-0.410
Instability index52.86
Isoelectric point5.81
Molecular weight62415.45
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
plasma membrane	GO:0005886	IEA:UniProtKB-SubCell

GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24404
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      95.92|      22|      22|      33|      54|       1
---------------------------------------------------------------------------
    9-   24 (20.89/11.05)	......CHIFLGALPEGPEDAE
   33-   54 (37.59/25.65)	YLMGYVCKAKVQALMQNYESAM
   57-   78 (37.44/25.52)	YIEGLKCDPNSTIVIDGFKRCM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.02|      15|      22|     177|     191|       3
---------------------------------------------------------------------------
  177-  191 (26.65/17.07)	ELQKANKHNEHAQNQ
  202-  216 (24.38/15.05)	ELQKANERYNQLQSK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      81.02|      26|      26|     108|     133|       5
---------------------------------------------------------------------------
  108-  133 (40.46/26.94)	SNELKKYMEEVAVFKKEASDERLRRI
  135-  160 (40.56/27.02)	SEQTARTSEANQVQRQKDAKEHLSKI
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24404 with Med32 domain of Kingdom Viridiplantae
Unable to open file!