<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24350

Description Uncharacterized protein
SequenceMKISLPYLSMAQCCREANTTIPMIPPSPASTVASTLSASSISSRMRSITIHHSESEAPSSNGSPQQNLNRSRTEVMRHHSRGAGGTPPQLFEPLELNANARPTRTPLSSMDSWDEFGRRSQSSWYNLSRNDDAISVSESATHHPMHESDDDHFSSPFHELENPGADAEMYGRLEEALRETQESKKEVFEESTKRRKAELDLLSALQKAKELEKLYHHEIRQRKTIEETLVRQAQELEATKIQCDTIYDQLHDAEEQKAVLEQRMTEMESALRDGEEKLATSKCLLEALQADKEKLQQERDAAATAAAELRQKSEQRISMATEALNTEFSAVELEQATRSFDEVLKIGEGGFGCVYKGSLRSTTVAIKLLHPKSLQGQSEFNQEVAVLGRVRHPNLVALIGSCREAFGLVYEYLPNGSLEDRLACANDTPPLTWQVRTRIIYEMCSALTFLHSNKPHPVVHGDLKPANILLDANLVSKLGDFGICRLLTQSGTSTAATTLYRTTTPRGTFAYMDPEFLSSGELTPRSDVYSLGIIILQLLTGRRPQKIAEVVEDAVEKGELHTVLDPSAGAWPFVQANQLAHLGLRCAEMSRRRRPDLAREVWTVVEPLMKAASLTARRPTFAASSALPDEASTPSYFVCPIFQEMMNDPHIAADGFTYEAEAIRGWLDSGHDTSPMTNLKLAHRELTPNRGLRSVILEWQQQHRQYHEDWR
Length711
PositionTail
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.06
Grand average of hydropathy-0.525
Instability index51.74
Isoelectric point5.70
Molecular weight79571.64
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24350
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     127.61|      49|      58|     172|     229|       1
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  172-  222 (76.73/54.11)	RLEEALRETQ.............ESKKEVFEES.TKRRKAELD..........LLSALQKAKelEKLYHH.........EIRQR
  231-  312 (50.88/21.41)	RQAQELEATKiqcdtiydqlhdaEEQKAVLEQRmTEMESALRDgeeklatskcLLEALQADK..EKLQQErdaaataaaELRQK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     128.16|      46|      50|     473|     522|       2
---------------------------------------------------------------------------
  455-  513 (67.59/53.53)	PHPVVHGDLkpanilldanlvSKLGDFGIC..RLLTQSGTSTAATTLyRTTTPRGTF.AYMD
  514-  565 (60.57/38.38)	PEFLSSGEL.........tprSDVYSLGIIilQLLTGRRPQKIAEVV.EDAVEKGELhTVLD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      95.15|      30|      52|     327|     356|       3
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  327-  356 (52.65/30.27)	EFS.AVELEQATRSFDEVLKIG..EGGFGCVYK
  379-  411 (42.50/23.30)	EFNqEVAVLGRVRHPNLVALIGscREAFGLVYE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.91|      13|      37|     103|     116|       5
---------------------------------------------------------------------------
  103-  116 (19.39/14.88)	TRTPLSSMDSwDEF
  141-  153 (27.52/14.86)	THHPMHESDD.DHF
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24350 with Med32 domain of Kingdom Viridiplantae
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