<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24349

Description Uncharacterized protein
SequenceMGAAADKHYSKKMKRPKSKTALGLMEAEASPCKIWFTCKGQLICTRPTRTPLSSMDSWDEFGRRSQSSWYNLSRNDDAISVSESATHHPMHESDDDHFSSPFHELENPGADAEMYGRLEEALRETQESKKEVFEESTKRRKAELDLLSALQKAKELEKLYHHEIRQRKTIEETLVRQAQELEATKIQCDTIYDQLHDAEEQKAVLEQRMTEMESALRDGEEKLATSKCLLEALQADKEKLQQERDAAATAAAELRQKSEQRISMATEALNTEFSAVELEQATRSFDEVLKIGEGGFGCVYKGSLRSTTVAIKLLHPKSLQGQSEFNQEVAVLGRVRHPNLVALIGSCREAFGLVYEYLPNGSLEDRLACANDTPPLTWQVRTRIIYEMCSALTFLHSNKPHPVVHGDLKPANILLDANLVSKLGDFGICRLLTQSGTSTAATTLYRTTTPRGTFAYMDPEFLSSGELTPRSDVYSLGIIILQLLTGRRPQKIAEVVEDAVEKGELHTVLDPSAGAWPFVQANQLAHLGLRCAEMSRRRRPDLAREVWTVVEPLMKAASLTARRPTFAASSALPDEASTPSYFVCPIFQEMMNDPHIAADGFTYEAEAIRGWLDSGHDTSPMTNLKLAHRELTPNRGLRSVILEWQQQHRQ
Length650
PositionTail
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.06
Grand average of hydropathy-0.502
Instability index49.32
Isoelectric point5.81
Molecular weight72928.68
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24349
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     127.61|      49|      58|     117|     174|       1
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  117-  167 (76.73/57.53)	RLEEALRETQ.............ESKKEVFEES.TKRRKAELD..........LLSALQKAKelEKLYHH.........EIRQR
  176-  257 (50.88/22.72)	RQAQELEATKiqcdtiydqlhdaEEQKAVLEQRmTEMESALRDgeeklatskcLLEALQADK..EKLQQErdaaataaaELRQK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     118.45|      41|      50|     418|     467|       2
---------------------------------------------------------------------------
  421-  465 (61.91/67.91)	SKLGDFGIC..RLLTQSGTSTAATTLyRTTTPRGTF.AYMDPeflSSG
  471-  514 (56.54/32.61)	SDVYSLGIIilQLLTGRRPQKIAEVV.EDAVEKGELhTVLDP...SAG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.96|      17|     193|     330|     366|       3
---------------------------------------------------------------------------
  291-  307 (33.68/30.47)	IG..EGGFGCVYK....GSLRST
  344-  366 (21.28/21.91)	IGscREAFGLVYEylpnGSLEDR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24349 with Med32 domain of Kingdom Viridiplantae
Unable to open file!