<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24343

Description Uncharacterized protein
SequenceMYSYSSHTALSSSEPKEAAIERDDGDDETFWSAQCSLSSSTGDERDEQQSSPGAEGTVFVALADDVNEGTSTLLWAMKNLAKDGSRVVIAHVRSPTRSTHRKGVSNHRNLQRDKAGKNMDGYALTAKRATQDLEIDCDEVVIEMDDVAEGLAQLIAIHGITRLVMGAAADQHYSKEMKKPKSKTALKLMDTAAPSCKIWFICDGHLICTSYKENLPAISPSPVQRTTPSSVCRISSQMRSMALKNEEASSNGYNSASSFESQMSDWDFLFGDWEKTTYISSRTDDAVGISGATTLPVIIGDAHKLRQVKHSPTYESDGIHLVPECHMEEALLVDEETHFGHQEVYTVAELWKGHDESNKRDKATQDLLSALQRANVSEDSYLHEVNQRKQIEEILTIQRLEIDEMKRRSYTLHDELQDSKKQKLMLEQHIIQIETARKDNVKEITDFFTEKSCEETKKCLKLEMDLLSALQKAREMENLYQNEKGRRLDMDVKITRQRVEIEETKKHRDELYYELKDLKEHMLKLKIIDVPDETNRRRRAERDLLSALEMVKDLEHGILREMRKQKEVEEAHAIREEEIQAMIQQLADINAKYISDMKSAIKFHEEELEKSKHFIQEIQAKYDKSLHERDTAVTEAKELRQKNKHGALVFSLSELQEATKCFDISLKIGEGGSGRVYKGFLRNTTVAIKLLHCQRLQRQQEFHQEVAFLSTVRHPNIMMFIGACQEASGSGLVYEFLPNRSLEEHLSCKEKKNTPPLTWQVRTRIIGEIWSALTFIHSHKPLPIVHGDLKPDNILLDANFVSKLRICQVSKNPRATKNTKDPKFLTTGELTPQCDVYSFGIVILRLLTGRSSQKIVVTVEKAMEKGHLHSIIDDSAGSWPYQQAGQLARLGLRCTNLSGKLQPDLIGGVWGELEPLMKAASRNAGRPSFAASSMTHTHHPALSVQSLGR
Length949
PositionTail
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.06
Grand average of hydropathy-0.580
Instability index46.78
Isoelectric point6.27
Molecular weight107459.70
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24343
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     138.52|      27|      28|     358|     384|       1
---------------------------------------------------------------------------
  358-  384 (46.47/32.51)	NKRD.....................................KATQDLLSALQRANVSE...DSY.LHE
  386-  414 (27.98/16.41)	NQR......................................KQIEEILT.IQRLEIDEmkrRSYtLHD
  420-  483 (22.96/12.04)	KKQKlmleqhiiqietarkdnvkeitdffteksceetkkclKLEMDLLSALQKAREME...NLY.QNE
  535-  561 (41.11/27.85)	NRRR.....................................RAERDLLSALEMVKDLE...HGI.LRE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     135.49|      46|      55|     632|     683|       2
---------------------------------------------------------------------------
  632-  683 (64.46/67.09)	AV..TEAKEL.RQKNKHGALVFsLSELQEAtkcfDISLKIG....EGGSGRVYKgFLRN
  687-  739 (71.03/50.32)	AIklLHCQRLqRQQEFHQEVAF.LSTVRHP....NIMMFIGacqeASGSGLVYE.FLPN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.31|      21|      79|      64|      89|       5
---------------------------------------------------------------------------
   64-   89 (25.36/35.57)	DDVNEGTSTLLwAMKNLakdgSRVVI
  145-  165 (35.96/25.73)	DDVAEGLAQLI.AIHGI....TRLVM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     100.38|      29|     484|     273|     301|       6
---------------------------------------------------------------------------
  273-  301 (50.37/36.27)	WEKTTYISSRTDDAVG.ISGATTLPVIIGD
  759-  788 (50.00/35.95)	WQVRTRIIGEIWSALTfIHSHKPLPIVHGD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.05|      27|      28|     567|     593|       7
---------------------------------------------------------------------------
  567-  593 (43.68/28.21)	EVEEAHAIREEEIQAMIQQLADINAKY
  596-  622 (45.37/29.58)	DMKSAIKFHEEELEKSKHFIQEIQAKY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.00|      16|      48|     440|     458|       9
---------------------------------------------------------------------------
  440-  458 (21.04/27.09)	NVKeITDFFTEksCEETKK
  491-  506 (27.96/19.92)	DVK.ITRQRVE..IEETKK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24343 with Med32 domain of Kingdom Viridiplantae
Unable to open file!