<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24335

Description Uncharacterized protein
SequenceSAFSSSKSKLCFANVSEDSYLHEVNQRKQIEEILTIQRLEIDEMKRRSYTLHDELQDSKKQKLMLEQHIIQIETARKDNVKEITDFFTEKSCEETKKCLKLEMDLLSALQKAREMENLYQNEKGRRLDMDVKITRQRVEIEETKKHRDELYYELKDLKEHMLKLKIIDVPDETNRRRRAERDLLSALEMVKDLEHGILREMRKQKEVEEAHAIREEEIQAMIQQLADINAKYISDMKSAIKFHEEELEKSKHFIQEIQAKYDKSLHERDTAVTEAKELRQKNKHGALVFSLSELQEATKCFDISLKIGEGGSGRVYKGFLRNTTVAIKLLHCQRLQRQQEFHQEVAFLSTVRHPNIMMFIGACQEASGSGLVYEFLPNRSLEEHLSCKEKKNTPPLTWQVRTRIIGEIWSALTFIHSHKPLPIVHGDLKPDNILLDANFVSKLRICQVSKNPRATKNTKDPKFLTTGELTPQCDVYSFGIVILRLLTGRSSQKIVVTVEKAMEKGHLHSIIDDSAGSWPYQQAGQLARLGLRCTNLSGKLQPDLIGGVWGELEPLMKAASRNA
Length563
PositionTail
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.06
Grand average of hydropathy-0.594
Instability index43.19
Isoelectric point8.33
Molecular weight65055.06
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24335
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     146.24|      23|      75|      94|     116|       1
---------------------------------------------------------------------------
   32-   52 (22.87/11.33)	EILTI...QRLEI.DEMK..RRSY.....TLH
   58-   84 (18.66/ 7.90)	SKKQK...LMLEQ.HIIQ.IETARkdnvkEIT
   94-  116 (35.23/21.42)	ETKKC...LKLEM.DLLSALQKAR.....EME
  120-  141 (27.72/15.29)	QNEKG...RRLDM.DVKITRQRV......EIE
  142-  168 (20.69/ 9.55)	ETKKHrdeLYYELkDLKEHMLKLK.....IID
  172-  191 (21.08/ 9.87)	ETNRR...RRAER.DLLSALEMVK........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     113.38|      37|      54|     291|     333|       2
---------------------------------------------------------------------------
  291-  333 (50.45/65.80)	LSELQEAtkcfDISLKIG....EGGSGRVYKgFLRNTTVAiKLLHCQ
  348-  388 (62.93/51.85)	LSTVRHP....NIMMFIGacqeASGSGLVYE.FLPNRSLE.EHLSCK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.42|      27|      28|     206|     232|       3
---------------------------------------------------------------------------
  206-  232 (43.24/26.41)	EVEEAHAIREEEIQAMIQQLADINAKY
  235-  261 (43.18/26.36)	DMKSAIKFHEEELEKSKHFIQEIQAKY
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24335 with Med32 domain of Kingdom Viridiplantae
Unable to open file!