<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24323

Description Uncharacterized protein
SequenceMYLSAFSTASHSGEPEAGKDISTIVAVDRDKNSQQAAKWAVDRLMARGSTLQLVHVRINQREAGRGVDTDAEMSQLFISYRGYCARKGMHLNEVILDGNDISKAIIDYATGHAITDIVVGASTRNTFIRRFRNPDVPTCLMKMAPDYCTVHVIHKGKAIQVKAAKSPAPFSILPLKQNSQPNIEPDAFPRPSRERRMVSNPSSPRTSRTSVDRLSGYAKVPTKDRHLLSGRQAPQKDFDDYIDFIAPPRPSVTRSSFSDDVDFPMSMELNSVDYAESIELSSYASLESLSSAGKDVEAEMRRLRLELKQTMEMYNSACKEALDAKQKAAQLSQMKVEESKLYQELRSSEEEALALVEMEKTKCKAALEAAEAAQKIAELEAQKRLRAEWKAKREFEERRRASDTDLRYRRYSIDDIEVATHKFDRALKIGEGGYGPVYKAVLDHTNVAIKILRPDASQGRKQFQQEIEILSSMRHPNMVLLLGACPEYGCLVYEYMDYGSLEDRLCRRGNTKPIPWNIRFRIAADIATGLLFLHQAKPEPLVHRDLKPGNILLDHNFVSKISDVGLARLVPQSIAEVTQYRMTSTAGTFCYIDPEYQQTGMLTTKSDIYSFGILLLQIITARSPMGLKHQVEHAIEKGAFQEVLDPTVTDWPVEEALAFTQLALKCAELRKKDRPDLGKEILPELNRLRTLGQEYEAAQVSNTSYSSATSYSFNNDDVSSP
Length721
PositionTail
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.07
Grand average of hydropathy-0.465
Instability index48.23
Isoelectric point6.96
Molecular weight80998.17
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24323
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     131.21|      41|      58|     172|     212|       1
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  172-  212 (74.85/47.54)	ILPLKQNSQPNIEP..D..AFPRPSRERRMVSNPSS.PRTSR.TSVD
  227-  273 (56.36/33.95)	LLSGRQAPQKDFDDyiDfiAPPRPSVTRSSFSDDVDfPMSMElNSVD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.64|      32|      59|     276|     327|       2
---------------------------------------------------------------------------
  276-  324 (32.28/54.21)	ESiELssYASLESlSSAgkdveaemrrlrlELKQTMEMYNSACKEALDA
  338-  369 (52.36/31.38)	ES.KL..YQELRS.SEE.............EALALVEMEKTKCKAALEA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     352.11|     113|     459|      42|     167|       3
---------------------------------------------------------------------------
   42-  167 (171.58/149.32)	DRLMARGSTlQLVHVRINQReagrgVDTDAEMSQLFISYRG..YCARKGMHLNEVILDGNDISKaIIDYATGHAITDIVVG......ASTRNTFIrrFRNPDV.PTCLMKMAPDYCTVHVIhkgkAIQVKAAKSP
  503-  624 (180.53/120.71)	DRLCRRGNT.KPIPWNIRFR.....IAADIATGLLFLHQAKpePLVHRDLKPGNILLDHNFVSK.ISDVGLARLVPQSIAEvtqyrmTSTAGTFC..YIDPEYqQTGMLTTKSDIYSFGIL....LLQIITARSP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24323 with Med32 domain of Kingdom Viridiplantae
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