<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24307

Description Uncharacterized protein
SequenceTGSLFALCAAKEEAKKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDGERLIGEAAKNQAAVNPERTVFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKEGKPYIQVKIKDGETKVFSPEEISAMILGKMKETAEAYLGKKINDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKRGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDHRIMDYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSNQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLEKTQIHEIVLVGGSTRIPKVQQLLRDYFDGKEPNKGVNPDEAVAFGAAVQGSILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSMTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIDRMVKEAEEFAEEDKKVKERIDARNQLETYVYNMKNTVGDKDKLADKLESEEKEKVEEALKEALEWLDENQTAEKEDYEEKLKEVEAVCNPIVSAVYQRSGGAPGGEGADGGVDDEDHDEL
Length650
PositionUnknown
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.06
Grand average of hydropathy-0.513
Instability index25.55
Isoelectric point5.08
Molecular weight71620.08
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24307
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      65.80|      14|      15|      83|      96|       1
---------------------------------------------------------------------------
   60-   73 (20.50/10.15)	DGERLIGEAAKNQA
   83-   96 (23.65/12.72)	DVKRLIGRKFEDKE
  100-  112 (21.65/11.09)	DMK.LVPYKIVNKE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.32|      13|      15|     168|     182|       2
---------------------------------------------------------------------------
  168-  180 (20.08/ 6.01)	AQRQATKDAGVIA
  185-  197 (19.23/ 8.80)	ARIINEPTAAAIA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.65|      20|      21|     571|     591|       3
---------------------------------------------------------------------------
  571-  591 (27.81/18.68)	DKLaDKLESEEKEKVEEALKE
  594-  613 (35.84/20.28)	EWL.DENQTAEKEDYEEKLKE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     244.22|      76|     104|     325|     401|       4
---------------------------------------------------------------------------
  325-  401 (123.79/86.46)	RKTMGPVKKAMDDAGLEKTQIH.EIVLVGGSTRIPKVQQLLRDY.FDGKEPNKGVNPDEAVAFGAAVQGsILSGEGGDE
  430-  507 (120.43/79.65)	RNTVIPTKKSQVFTTYQDQQTTvSIQVFEGERSMTKDCRLLGKFdLSGIPPAPRGTPQIEVTFEVDANG.ILNVKAEDK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.02|      11|      25|     214|     224|       7
---------------------------------------------------------------------------
  214-  224 (20.52/10.49)	LGGGTFDVSIL
  242-  252 (22.49/12.14)	LGGEDFDHRIM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.25|      14|      21|      20|      33|       8
---------------------------------------------------------------------------
   20-   33 (26.89/19.47)	VIGIDLGT..TYSCVG
   42-   57 (23.36/15.91)	IIANDQGNriTPSWVG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24307 with Med37 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KDKLADKLESEEKEKVEEALKEALEWLDENQTAEKEDYEEKLKE
570
613










Molecular Recognition Features






MoRF SequenceStartStop




NANANA