<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24223

Description Uncharacterized protein
SequenceGLCKVPASQVEEKELKAYRKIEKEEMNTLLNQYLNFCRVSLKMQAETLVIEKNSPANGIIELIDQNRITKLVMGTSSFSVKRKVPKSKVAASVHLQAKPYCQIFYICKEALGCSREATELCAKVESPRSSFASTISDQPELTPRSLSLPPGHPGLLGATGQQPFPRRSNSVSYPLSGLIADSVENMSAARRQSIDSLLGSTDQQALPRRSNSVSYSLSGSIAGSVEIMSPARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPASVASSEEHQHSTVEIHEMFEQLHRVRNQLERSKKEASEGRQKAERDLFESSMMFKARESSLRKEKKEVEERLTKEKADLEKEHFHVCNELQKANEQRAELESKLLQTNALMEELQQLQVELQREKDHAVKEAEEMRQTNGNSVFGSTSAVALTEFSYTEIEEATDNFDDSKKIGSGGCGTVYKGFLRHTTVAIKKFNREGTTGDKEFNDEVETLSRMRHPNLVTLIGVCREAKALVFEFLSNGSLENCLQGEHQREPLSWRMRIRIAADICTGLIFLHSNKPKGIAHGDLKPDNVLLDNSFVCKLADFGISRPLDLTNTTVTPYHRTNQIKGTMGYMDPGYIASGEITAQYDVYSFGVVLMRLLTGKSPLGLPNEVEAALSNDMLQDIIDTSAGEWPTEYTEELARLALRCCRYERKERPNLANEAWGILQAMMNCPDDKCKPPTFFICPMTQEIMRDPHIAADGFTYEGEAIKDWLQRGHKCPP
Length757
PositionTail
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.06
Grand average of hydropathy-0.527
Instability index44.78
Isoelectric point5.97
Molecular weight84354.60
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24223
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     162.34|      41|      41|     155|     195|       1
---------------------------------------------------------------------------
  155-  195 (82.01/58.18)	LLGATGQQPFPRRSNSVSYPLSGLIADSVENMSAARRQSID
  197-  237 (80.33/56.83)	LLGSTDQQALPRRSNSVSYSLSGSIAGSVEIMSPARRQSID
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     196.74|      42|      47|     292|     338|       3
---------------------------------------------------------------------------
  278-  309 (50.08/30.79)	EEHQHST..VEIHE...MF...............EQLHRVRNQLERSK....KEAS
  310-  359 (56.99/43.88)	EGRQKAE..RDLFESSMMFKARESSLrkekkeveERLTKEKADLEKEH....FHVC
  360-  405 (38.45/21.91)	NELQKANeqRAELESKLL...QTNAL.......mEELQQLQVELQREKdhavKEAE
  406-  447 (51.21/31.65)	EMRQTNG..NSVFGSTSAVALTEFS........yTEIEEATDNFDDSK....KIGS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      99.00|      32|      41|      68|      99|       6
---------------------------------------------------------------------------
   68-   99 (52.43/29.27)	ITKLVMGTS....SFSVKRKVPKSKVAASVHLQAK..P
  106-  143 (46.57/25.29)	ICKEALGCSreatELCAKVESPRSSFASTISDQPEltP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24223 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ASTISDQPELTPRSLSLPPGHPGLLGATGQQP
2) EIMSPARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPASVASSEEHQHSTVEIHEMFEQLHRVRNQLERSKKEASEGRQKAERDLFESSMMFKA
132
226
163
328










Molecular Recognition Features






MoRF SequenceStartStop




NANANA