<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24218

Description Uncharacterized protein
SequenceREKRETSYLSIRHGRGLRLAGAGAVLLRVWREDEEGVRGGGGRVRLQGHGAVGAAQVPQRLRRRLLVGARIPASQVQEQELIAYKKMELQTISDTLDQHLLLCAQEKVQAEKLVVESEDVAEGLVQLIAMHHVTALVMGAAADKHYTKEMRALKSKKARAVEQRADPSCKIWYICKGTLVYRRNAVPLGHEATPEGTQESAAQQFSVDRSTSLSETWCVSSTWLHKPHARLQMERTSPCGSDDNGKEIVKEFDEADIKFQHMLRELESVKKQAYEEKHGREKAEQDLFQAFQKARVSENMYLGEVKQKNEIEEKLATVMEEIESLTETTDGLCAKLQEERKKRSALEKRTAHSDRIIKDLLLQRDKAVREVEALHAKKGESSATAEGTMHITELSSSEIKDATNNFDHSLKIGESVYGSVYKGFLRHTNVAIKKLNLESTQPESQSQSQFNQEIEILSRVRHPNLVTLIGACKDAQALVYEYMPNGSLDDRLACKDNSKPLSWQLRTRIISHVCSALIFLHSNKPHSIVHSDLKASNILLDGNNVAKLSGFGVCRMITDEFRDTTTLYRHTHPKGSFVYIDPEYVMTGDLTPLSDVYSFGIVLLRLLTGRPGFGLLRDVQRAVEKGCLGAILDSSAGGWPAMQAEQLARVGLKCCEIRRKNRPDLQKEVWTVIEPMLKPASIMLCSLSFKSVSEDLGGVPPYFICPILQDVMREPLIAADGFTYEAEAIREWIDSGHHTSPMTNLELLHRDLLPNHALRSAIQEWLQTDAQ
Length771
PositionTail
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.06
Grand average of hydropathy-0.424
Instability index43.56
Isoelectric point7.02
Molecular weight86534.81
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24218
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     108.13|      38|     257|      87|     136|       1
---------------------------------------------------------------------------
   93-  136 (54.11/64.17)	SDTLDQHLLLCAQEKV.QAEKLVV...ESEDVAEGlvqliAMhHVTAL
  353-  394 (54.02/32.32)	SDRIIKDLLLQRDKAVrEVEALHAkkgESSATAEG.....TM.HITEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.72|      15|      26|      11|      25|       2
---------------------------------------------------------------------------
   11-   25 (28.50/18.91)	IRHGRG.LRLAGAGAV
   37-   52 (25.23/15.80)	VRGGGGrVRLQGHGAV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     129.51|      41|     351|     289|     333|       3
---------------------------------------------------------------------------
  289-  333 (60.13/45.73)	QAFQKARVseNMYLGEVKQKN..EIEEKLATVMEEIesLTETTDGLC
  643-  685 (69.38/41.04)	QAEQLARV..GLKCCEIRRKNrpDLQKEVWTVIEPM..LKPASIMLC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.78|      19|     396|     176|     194|       4
---------------------------------------------------------------------------
  176-  194 (32.88/22.28)	KGTLVYRRNAVPLGHEATP
  574-  592 (32.90/22.30)	KGSFVYIDPEYVMTGDLTP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.57|      23|     447|     241|     281|       5
---------------------------------------------------------------------------
  142-  164 (38.06/15.56)	ADKHYTKEMRALKSKKARAVEQR
  255-  277 (38.51/24.56)	ADIKFQHMLRELESVKKQAYEEK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24218 with Med32 domain of Kingdom Viridiplantae
Unable to open file!