<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24210

Description Uncharacterized protein
SequenceMNTLLNQYLNFCRVSLKMQAETLVIEKNSPANGIIELIDQNRITKLVMGTSSFSVKRKVPKSKVAASVHLQAKPYCQIFYICKEALGCSREATELCAKVESPRSSFASTISDQPELTPRSLSLPPGHPGLLGATGQQPFPRRSNSVSYPLSGLIADSVENMSAARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPASVASSEEHQHSTVEIHEMFEQLHRVRNQLERSKKEASEGRQKAERDLFESSMMFKARESSLRKEKKEVEERLTKEKADLEKEHFHVCNELQKANEQRAELESKLLQTNALMEELQQLQVELQREKDHAVKEAEEMRQTNGNSVFGSTSAVALTEFSYTEIEEATDNFDDSKKIGSGGCGTVYKGFLRHTTVAIKKFNREGTTGDKEFNDEVETLSRMRHPNLVTLIGVCREAKALVFEFLSNGSLENCLQGEHQREPLSWRMRIRIAADICTGLIFLHSNKPKGIAHGDLKPDNVLLDNSFVCKLADFGISRPLDLTNTTVTPYHRTNQIKGTMGYMDPGYIASGEITAQYDVYSFGVVLMRLLTGKSPLGLPNEVEAALSNDMLQDIIDTSAGEWPTEYTEELARLALRCCRYERKERPNLANEAWGILQAMMNCPDDKCKPPTFFICPMTQEIMRDPHIAADGFTYEGEAIKDWLQRGHKCPP
Length690
PositionTail
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.06
Grand average of hydropathy-0.522
Instability index40.69
Isoelectric point5.89
Molecular weight77062.46
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24210
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     147.87|      30|      47|     219|     248|       2
---------------------------------------------------------------------------
  211-  242 (42.03/23.93)	EEHQHS..........tvEIHEM.FEQLHRV.RNQLERSK....K.EAS
  243-  262 (17.95/ 6.42)	EGRQKA.........................eRDLFESSM....MfKAR
  263-  292 (36.28/19.75)	ESSLRK............EKKEV.EERLTKE.KADLEKEH....F.HVC
  293-  338 (24.30/11.04)	NELQKAneqraeleskllQTNAL.MEELQQL.QVELQREKdhavK.EAE
  339-  380 (27.31/13.22)	EMRQTN.gnsvfgstsavALTEFsYTEIEEA.TDNFDDSK....K.IGS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.83|      16|      21|     112|     131|       3
---------------------------------------------------------------------------
  112-  131 (22.94/24.24)	DQPelTPR...SLSLPpgHPGLL
  136-  154 (26.89/13.69)	QQP..FPRrsnSVSYP..LSGLI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.54|      20|      73|      90|     109|       8
---------------------------------------------------------------------------
   90-  109 (33.96/20.61)	REATELCAKVESPRSSFAST
  166-  185 (35.58/21.94)	RQSIDMTPTGSSPSSSQQST
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24210 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ASTISDQPELTPRSLSLPPGHPGLLGATGQQPFPRRSNSV
2) MSAARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPASVASSEEHQHSTVEIHEMFEQLHRVRNQLERSKKEASEGRQKAERDLFESSMMFKA
107
161
146
261










Molecular Recognition Features






MoRF SequenceStartStop




NANANA