<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24201

Description Uncharacterized protein
SequenceGDPHFDPHHRRDAELNGRVRSEQVHARKVIVSGDDAARGLVQLVDDNAIAELVMGAAADRGYTRKLRAPKSKKAVTVQRKANPSCRIWFVCKGNLICTREVSEGLSRGEPSTASTSPRSVASDYSRSKSSPPRLTLYGDGDGELLGMHHDSPDPMMAASFQRTPSRDDSDNATDHSVEDSGHEGAAEGGSSAVVQSLQDVEEDPPTPSHDGSEEAGDMEDALYEKLKDAIMEAGSLRHEAYEETRRRQKADRDLADVSMMARDAESSYHGEARRRKEMEESLARERAAVEQDRRELDAILEKIREVDNRSAELELQISDSGRVMGELDVRMSESCSVLDALRREHRGEEPAADEESMPAVDGGDQSVSFLQLGLLELEEATDRFNESTMIGGASAGSRGRVYRGSLRGMSVAVKMICPDVAVHEARFGRAVDAIARARHPNIVALVGACPEARAVVHELVPGGSLEDRLGGEAPPLPWHARCGIAYRTCSALAYLHSTATVHGDVRPTNILLEDEQCSSSKLAGLGMPGFVAPPQLPSGVALAYVEPRYLATGELTPQCDVHALGVVLLCLVTGMPAFAAKKAAQKANDGSTPWHEVVDATAGGWPMERATEVALLGLKCCDAVETGGPHRPAELLDEALSVLEAATDATPGRTWSSLSASTASDSGGAPSYFLCPILKEVMRDPQIAGDGFTYEAEAMKEWLGSGHDTSPMTNLKLPTDELMPNHALRAAIQEWRHTRPSTFQRYQ
Length747
PositionTail
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.04
Grand average of hydropathy-0.475
Instability index47.56
Isoelectric point5.14
Molecular weight80689.20
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats
>MDP24201
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     139.20|      39|      47|     210|     248|       1
---------------------------------------------------------------------------
  167-  192 (29.61/12.61)	...............DDSDNATDhsVEDSGH..E....GAAEGGS...S..A
  200-  240 (63.86/35.78)	VEEDPPTP.....shDGSEEAGD..MEDALY..EKLKDAIMEAGSLRHE..A
  241-  288 (45.73/23.51)	YEETRRRQkadrdlaDVSMMARD..AESS.YhgEARRRKEMEE.SLAREraA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     138.20|      42|     548|     111|     155|       5
---------------------------------------------------------------------------
  111-  155 (68.91/55.67)	STASTS...PRSVASDYSRSKSSPPRLTlyGDG.......DGELLGMHHDSpDPM
  661-  712 (69.28/44.02)	STASDSggaPSYFLCPILKEVMRDPQIA..GDGftyeaeaMKEWLGSGHDT.SPM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.41|      22|      35|     290|     312|       7
---------------------------------------------------------------------------
  290-  312 (31.64/25.34)	EQDRR..ELDAILEKIREvDNRSAE
  326-  349 (32.77/21.17)	ELDVRmsESCSVLDALRR.EHRGEE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24201 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EAGSLRHEAYEETRRRQKADRDLADVSMMARDAESSYHGEARRRKEMEESLARERAAVEQ
2) VSEGLSRGEPSTASTSPRSVASDYSRSKSSPPRLTLYGDGDGELLGMHHDSPDPMMAASFQRTPSRDDSDNATDHSVEDSGHEGAAEGGSSAVVQSLQDVEEDPPTPSHDGSEEAGDMEDALYEKLKDA
232
101
291
229










Molecular Recognition Features






MoRF SequenceStartStop




1) MEDALYEKLKDA
2) YTRKLRA
218
62
229
68