<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24144

Description Uncharacterized protein
SequenceMKEIVQRQAEEIQRNLKEKKIPAAPKSPSFEKEDSFQIAHDTVLGLVECIRQNGGATPDGDPSAVASAVSAVVVNAGHVIAKHLDFAGGNYHGVASIGNSLSFVRHTLHIHINSLCLLKEALGDRFSRVFEVALAVEASSAVTAAFAPPKVQRNQFQPSSETHDAYGNHTNEPLSTSGKGFVGRAGKVAAAISALVVGAVVHGAVSLERMIAVLKVKDGLEIQQVLRGLRPSNNGASRSAVTFKMDNSIEVLVHWFRILLGNCRTVYDGLIADILGESYVLALSRLQQKLPLSVVFPPAYSIFAIVRWRQYILSREDMQVYQSIANAINDITRHQPFRDICFRNTHQLYDLLAADVGDSEFAAMLETHCSDKNVRQLFMPLRGRLFLNALVDCKTPAVIQVDGSEPGEAKENELKVLSERLVQSLDTLQPAKFHWQWVELRLLLDEQALAEKLDKAEKSKIPMPILMTLADGLRKLSPNSESFTLSESEKGFTEIILSRLVARPDAAPLYSEVVHLLGKLQESLVVDVKWILQGQDAVLGRKSTRQQLLTIATRRGVPIKAQVWKPWGWSSLLTDVMANRSAKRKLEAAPIEEGEVVDDPADAKRPSKSTPNNVDRSVEATRSNINKYVTEKAFAELMLPCIDRSSPEFRSIFAGELIKQMGTVSEHIKAISRNGAKHVGLVPSGNDVSSNKSSGRKGIRGGSPNIGRRVTVGNDPTPPSASALQAIVWLRLQFIIRLLQVILADRGMRHTLAPAILSLLAARIIYEDADSPLPPASLIASRREVDSLLEPPMDVLLDRPSESLFERLLCVFHALLGNCKPSWMKSKPVSKPTVRASRDIPAFDNEAAVALQSALDHMELPGAIRRRIQAAMPILPPARHPSIQCQPSQLSLAALSPLQSTPSTSGPQQKSTSHSWVPTNISSRSKAVLPPQDPEMEVDPWTLLEDGTSCPSTSSGSNSASGIAPDHSNLKACSWLKGAVRVRRAELTYIGSLDDDS
Length997
PositionKinase
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.05
Grand average of hydropathy-0.154
Instability index50.61
Isoelectric point8.71
Molecular weight108888.54
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24144
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.02|      11|     107|     575|     585|       1
---------------------------------------------------------------------------
  575-  585 (19.62/11.41)	DVMANRSAKRK
  687-  697 (19.40/11.21)	DVSSNKSSGRK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.32|      13|     243|     719|     731|       2
---------------------------------------------------------------------------
  719-  731 (23.69/16.48)	PSASALQAIVWLR
  965-  977 (26.63/19.56)	PDHSNLKACSWLK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     315.03|      93|     310|     168|     260|       4
---------------------------------------------------------------------------
   60-  151 (89.39/63.53)	.................GDPSAVASAVSAVVVnaghviakhldfaGGNYHGVASIGNSLSF..VRHTLHIHiNSLCLLKEALGDrfSRVFEVALAVEASSAVTAAFAPPKV
  168-  260 (149.82/112.30)	NHTNEPLSTSGKGF..VGRAGKVAAAISALVV.............GAVVHGAVSLERMIAVLKVKDGLEIQ.QVLRGLRPSNNG..ASRSAVTFKMDNSIEVLVHWFRILL
  479-  542 (75.83/52.59)	NSESFTLSESEKGFteIILSRLVARPDAAPLY.............SEVVHLLGKLQESL.VVDVKWILQGQ.DAVLGRK................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.76|      12|     576|     285|     299|       5
---------------------------------------------------------------------------
  285-  299 (18.42/17.65)	RLQQKLPlsvVFPPA
  867-  878 (23.35/13.18)	RIQAAMP...ILPPA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     134.86|      42|     425|     360|     406|       6
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  360-  406 (61.52/58.80)	EFAAMLETHCS...DKNVRQLFMPLRGrLFLNALVDCKtPAVIQvdgSEP
  784-  828 (73.34/49.77)	EVDSLLEPPMDvllDRPSESLFERLLC.VFHALLGNCK.PSWMK...SKP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      32.02|      10|      18|     752|     763|       8
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  752-  763 (12.93/11.69)	LAPAilSLLAAR
  773-  782 (19.09/10.03)	LPPA..SLIASR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.48|      16|      79|     262|     278|      10
---------------------------------------------------------------------------
  262-  278 (26.08/20.82)	NCRTVYDGLIADIlGES
  344-  359 (29.40/18.58)	NTHQLYDLLAADV.GDS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24144 with Med12 domain of Kingdom Viridiplantae
Unable to open file!