<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24135

Description Uncharacterized protein
SequenceVEALELLLPIVLGLVETITLSQTYVRMFVEILVRRLSDASAVDNPKRSSISSVIAELLRYMVLAVPDTFVSLDCFPLPSFVAPDVYGRGALLKITGGGEMSSSKRRDVYRYLSCGYAVCSIQRRASDLATLASPNVHARGAAKVVQALDKALVTGNLTMAYSSLFNDLSDALMEERWIKEVSPCLQSSLMWIGTVELSLICSIFFLCEWATCDYRDCRTSPSQNVKFTGRRDLSQIHLAVSILKNKMTEMNKLSRSKSSSRIAMNNIGKGSSLNDASVAATKVGDSSGLRSNGKNEEEKKERKDIFESPGPLHDIIVCWLDQHEVSSAAGFKRVDVLIIELIRSGVFYPQAYVRQLIISGVTDKNGTLLDMERKRRHHRILKQLPGSSLFDILEEDVVAEEQQLHEVMSTYSSERRLVLSELSSGQSFDANNRGEYTSSSYLRIPSGTNHGGVPEQVEDVKVLVSSLLCFIYPHSAESEQNETKMNFQGSSTSTLTQVDTGEAKNGCEDCMRINGQKLDERTSPFFPLIQSDEEDVWWVRKGTELQESFKAEPALKSIKQTSRGRAKVVRKTQNLAQLATAKIEGSQGEASTSHLCESKLSCPHHKPSTDGDNGKDADHTRMTNLAEVGKSLKKLRLLERRSISVWLLKSVRQLVEGNETTACKASNSISSFSSQPDDKTVPKWRLGDEELMSILYILDTCCDLASAARFLVWLLAKIRGGMGTLGQVGRSAAHMKNRDNQVCQVGEAFVFSSLLRYENILLATDLLPEVLNASTNRNFVLGTARHPAPAAFPYTRYFLRKYRDVASVVRWEKIFRTTCDQRLLADLDNGRSIDGDFVSSSGVLGGEEIDDQVRQKLSGRGSRIIPNMKEIVQRQAEEIQRNLKEKKIPAAPKSPSFEKEDSFQIAHDTVLGLVECIRQNGGATPDGDPSAVASAVSAVVVNAGHVIAKHLDFAGGNYHGVASIGNSLSFVRHTLHIHINSLCLLKEALGDRFSRVFEVALAVEASSAVTAAFAPPKVQRNQFQPSSETHDAYGNHTNEPLSTSGKGFVGRAGKVAAAISALVVGAVVHGAVSLERMIAVLKVKDGLEIQQVLRGLRPSNNGASRSAVTFKMDNSIEVLVHWFRILLGNCRTVYDGLIADILGESYVLALSRLQQKLPLSVVFPPAYSIFAIVRWRQYILSREDMQVYQSIANAINDITRHQPFRDICFRNTHQLYDLLAADVGDSEFAAMLETHCSDKNVRQLFMPLRGRLFLNALVDCKTPAVIQVDGSEPGEAKENELKVLSERLVQSLDTLQPAKFHWQWVELRLLLDEQALAEKLDKAEKSKIPMPILMTLADGLRKLSPNSESFTLSESEKGFTEIILSRLVARPDAAPLYSEVVHLLGKLQESLVVDVKWILQGQDAVLGRKSTRQQLLTIATRRGVPIKAQVWKPWGWSSLLTDVMANRSAKRKLEAAPIEEGEVVDDPADAKRPSKSTPNNVDRSVEATRSNINKYVTEKAFAELMLPCIDRSSPEFRSIFAGELIKQMGTVSEHIKAISRNGAKHVGLVPSGNDVSSNKSSGRKGIRGGSPNIGRRVTVGNDPTPPSASALQAIVWLRLQFIIRLLQVILADR
Length1613
PositionKinase
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.06
Grand average of hydropathy-0.204
Instability index47.12
Isoelectric point8.61
Molecular weight178033.43
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24135
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     152.13|      50|     422|     577|     632|       1
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  512-  555 (55.69/30.73)	.....RINGQKL...DERTS.........PFF.PLIQSDE.EDVWWVRKgTELQESFKaepAL
  577-  632 (75.36/63.17)	QLataKIEGSQG...EASTShlCESKLSCPHHKPSTDGDNgKDADHTRM.TNLAEVGK...SL
  653-  679 (21.08/ 6.98)	QL....VEGNETtacKASNS..ISSFSSQPDDK..............................
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     235.77|      76|     309|    1035|    1111|       2
---------------------------------------------------------------------------
 1035- 1111 (120.00/76.46)	NHTNEPLSTSGKGF..VGRAGKVAAAISALVVGAVVHGAVSLERMIaVLKVKDGLEIQQVLRGLRPSNNG....ASRSAVTFK
 1346- 1427 (115.77/69.71)	NSESFTLSESEKGFteIILSRLVARPDAAPLYSEVVHLLGKLQESL.VVDVKWILQGQDAVLGRKSTRQQlltiATRRGVPIK
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      31.84|      10|     422|     139|     148|       3
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  139-  148 (18.07/11.80)	RGAAKVV...QAL
  563-  575 (13.77/ 7.06)	RGRAKVVrktQNL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.48|      17|     422|    1164|    1180|       4
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 1164- 1180 (33.41/24.61)	PPAYSIFAIVRW.R.QYIL
 1585- 1603 (23.07/14.46)	PPSASALQAIVWlRlQFII
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     179.85|      59|     422|     420|     506|       5
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  345-  416 (76.44/67.42)	GVFYPQAYVRqlIISGvTDKNGTLLDMERkrrhhriLKQLPGSSLFDILEEDvvAEEQQlHEVMSTYSSERR
  434-  492 (103.41/84.70)	GEYTSSSYLR..IPSG.TNHGGVPEQVED.......VKVLVSSLLCFIYPHS..AESEQ.NETKMNFQGSST
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     215.08|      71|     422|     804|     919|       6
---------------------------------------------------------------------------
  823-  897 (109.85/119.49)	LLADLDNGRSIDGDfVSSSGVLGGEEIDDQVRQKlsgRGSRIIP.NMKEIVQRQAEEIQRNLKEKK.....IPAAPK.SPSF
 1439- 1516 (105.23/49.81)	LLTDVMANRSAKRK.LEAAPIEEGEVVDDPADAK...RPSKSTPnNVDRSVEATRSNINKYVTEKAfaelmLPCIDRsSPEF
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     122.56|      43|     896|      11|      60|       9
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   11-   60 (63.11/67.47)	VLGLVET.ITLSQTYVRMFV..EILVR....RLSDASAVDNPKRSsissviaELLRY
   62-  111 (59.45/46.84)	VLAVPDTfVSLDCFPLPSFVapDVYGRgallKITGGGEMSSSKRR.......DVYRY
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24135 with Med12 domain of Kingdom Viridiplantae
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