<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24121

Description Uncharacterized protein
SequencePFSAATIRGRSARRRPKTPTVPTSTTGAPRLAEVLPIAAMAQDHRTIKVARDEDLRSQIGSGGFYFDLVDFDRVRAFQVPVDTTVILFMEELAKELGTPVKFQRLWLCQRRQNGTRRPSRPLNSKEKKLSIGRVFSADVKLFLEVFNPCSPRNLNREYLLVFLKFYDPEQTQLRYIGTLFVSCSSRPLDILPKLRSLAGFCADEEIELYEEIKFEPNVMCEALDIHHTFTVNQIENGDIICFQKRPKSCNQHLYPSVKLFLEHVHKLTKEGRKICALEEEIVEFRRLSDLNIAANLECTQLRHERDNAILQVDEFRGQNDLVRLQIEEAKKECNQLRHERDNAVRQIDALLNQNTVGRIQIEEAKMECSQLKHERDNAVRQVDELWDRNSQFILEFRFTCLEQATEHFKDLCKIGDTEYGCVYKGIINNTTVAIKLSKSESLFQQEVSVLRQGGRHANIVTFVGMCSEVSALVYEWLPKGNLEDRILCADDTPPLSWHIRTQIIREVCCALLFLHSHKPNASVHGDLRPCNILIGADYRSKLYNFGMSTLFLQPGSCPPNLTSRLPYTDPEFLTIGDLTPLSDVYSLGVIILRLLTGMPPLAITKKVREAFRSDNLHLLIDKSAGDWPYTQAKQLALLGLRCVEMTREKRPDLTEVWTVVEALVRKPPAPSCPAHFICPILQEIMNDPQMASDGFTYEAEAIRRWLDGGSNRSPMTNLALPNRVLIPNRALRSSIQEYLQASVAKAVSSLNLNL
Length754
PositionTail
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.07
Grand average of hydropathy-0.280
Instability index52.93
Isoelectric point7.87
Molecular weight85931.91
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24121
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     202.99|      33|      33|     318|     350|       1
---------------------------------------------------------------------------
  238-  277 (31.91/19.90)	..DIICFQ..KRPKSCNQhlypsvklfleHVHKLTKEGRKICAL
  287-  315 (48.91/34.65)	LSD...LNI.AANLECTQ...........LRHERDNAILQVDEF
  318-  350 (62.53/46.47)	QNDLVRLQIEEAKKECNQ...........LRHERDNAVRQIDAL
  353-  385 (59.63/43.96)	QNTVGRIQIEEAKMECSQ...........LKHERDNAVRQVDEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     156.50|      41|     285|     191|     232|       2
---------------------------------------------------------------------------
   90-  119 (35.40/20.29)	..............EELakELGTPVKFQRLWLCQRRQ.NGTRRPS
  126-  161 (54.19/35.77)	EKKL.SIGRvFSAD..V..KLFLEV.FNP...CSPRNLNREYLLV
  191-  232 (66.92/51.10)	LPKLrSLAG.FCADEEI..ELYEEIKFEPNVMCEALDIHHTFTVN
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24121 with Med32 domain of Kingdom Viridiplantae
Unable to open file!