<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP24025

Description Uncharacterized protein
SequenceMASLSSPWVEWAGEYTKAAQAEALPPNEWAARVATAAAAAGERGDVQFSAGLAEMLARVVLSGESSGAAPAAAWKYAEAALAARLASPALLLTLLSSRVIPQRVARPTAYRLYLELLRRHGFKLCFQMKAANSNKIRQLIDDNLNLSQIFGFSACEPGVFIVEFVLCILWQLVDTALDDESLLELTPEKKAQWPTRPQDISAFEVSFSEQKPEKIEKLQRMNSVITIELIGHLLHNKVITRILSLARENMQTQWGLFTYRLRLLVANSSTLQASTMSLVAFQQLILDDHNVHGENKHSLHKKFHPMVASNPLSSPNGHCLGGSYSALWTPIDMYLEDCLDGSIAATNSIEILSGLVKALQAVNRSSWHDAFMALWIASVRLVQRASLHSSSCLIIETTFHILIFDPVKQTGTRTD
Length415
PositionTail
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.08
Grand average of hydropathy0.064
Instability index45.22
Isoelectric point6.64
Molecular weight45804.18
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP24025
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.11|      15|      17|       7|      21|       1
---------------------------------------------------------------------------
    7-   21 (30.33/21.24)	PWVEWAGEYTKAAQA
   25-   39 (27.78/18.84)	PPNEWAARVATAAAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.46|      16|      18|     311|     326|       2
---------------------------------------------------------------------------
  311-  326 (30.64/18.90)	PLSSPNGHCLGGSYSA
  330-  345 (27.82/16.61)	PIDMYLEDCLDGSIAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.70|      12|      24|     181|     192|       3
---------------------------------------------------------------------------
  181-  192 (20.63/16.28)	SLLELTPEK..KAQ
  206-  219 (17.07/12.16)	SFSEQKPEKieKLQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.41|      12|      20|      84|      95|       4
---------------------------------------------------------------------------
   84-   95 (20.10/13.30)	RLASPA...LLLTLL
  103-  117 (16.31/ 9.37)	RVARPTayrLYLELL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP24025 with Med33 domain of Kingdom Viridiplantae
Unable to open file!