<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23974

Description Uncharacterized protein
SequenceMTQDQESVYPIEGPQPMDMDVKGVSAVKQNEQREQLRRRNIVMALEVLHIMAADTKIQAFLRLICLNMPDKFSVLSQRLTLIEAHKMALERLLPTSHKIDDLVMYIWRVSNLDYQPNNKRLVGVLGNLRSSNSMLGQLTGAGRAACWIIFDIYMENAMDGRHLGGISAIEIIKEMSKTAQAINEASWQETFKALWISALRLVQRAREPLEGPIPHLDTRLCMLLALIPLAIAAILKEETDACGAEGNKSLPRRLGLVSSLQDLVQYSGLLVPPSSLVNVANAAASKAAIFRANCKVVGGNPSMIGQSDSSTKAVGNMLHLIVEACISRNLIDTTAYLWPGYVVLPGHSKDTSLPQESPWVNFMQGAPLSDPLKNALIATPASSVAELDKLYHIALNGSEQEKSAAAKIVCGASLVRGWNIQEHVVRMVVKLLSPPLPSDSSLQGSMSHYLSQKSTLNAILLGVSYVDAVHIFSLYGMVPDVAAALMPLCEAFGSMPPPSNHRSTIVDETSVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVRLELTLDYLVLMHNSRIEFPNSSATSTNSGSSTGSFDEVPTQPIYIDSFPKLRAWYIQNQACIASTLSGLGNTNPVHQVANKILSMICRKMTKSGVVSGNLSSASSSSVSGSSLSTSDDSYQRPTLPAWEFLEAVPYVLEAVLTACYHGRISSRDMT
Length701
PositionTail
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.06
Grand average of hydropathy0.045
Instability index54.09
Isoelectric point7.21
Molecular weight76473.42
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23974
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     390.76|     131|     161|      54|     213|       1
---------------------------------------------------------------------------
   54-  213 (183.42/141.10)	DTKIQAFLRLICLNMPdkfSVLSQRLTLI..EAHKmALERLLPTSHKIDDLVMYiwrvSNLDYQPN..................NKRLVGvlGNlrssNSMLGQlTGAGRAACWIIFDIYMENAMdGRHLGGISA.....IEIIKEMSKTAQAINEASWQETFkalwisalrlvQRArePLEGPI
  217-  372 (207.35/101.29)	DTRLCMLLALIPLAIA...AILKEETDACgaEGNK.SLPRRLGLVSSLQDLVQY....SGLLVPPSslvnvanaaaskaaifraNCKVVG..GN....PSMIGQ.SDSSTKAVGNMLHLIVEACI.SRNLIDTTAylwpgYVVLPGHSKDTSLPQESPWVNFM...........QGA..PLSDPL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     129.30|      44|      48|     408|     455|       2
---------------------------------------------------------------------------
  422-  469 (61.96/49.85)	EHVVRMVVKLLSPPLPSDSSLqGSMSHYLSQKST.......lnaILLG.VSYVDAV
  472-  526 (67.34/37.34)	FSLYGMVPDVAAALMPLCEAF.GSMPPPSNHRSTivdetsvysvFSCAfLCLLRLW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.43|      17|      78|     566|     582|       3
---------------------------------------------------------------------------
  566-  582 (30.66/16.93)	SSATSTN.SGSSTGSFDE
  646-  663 (24.77/12.35)	SSASSSSvSGSSLSTSDD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23974 with Med33 domain of Kingdom Viridiplantae
Unable to open file!