<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23931

Description Uncharacterized protein
SequenceAHSGPFQNHHPPPRSATARIARARTFQTRPPAASAIKPRPSPALPPHFRSKSKSERGKANRTRQTQRVFRRTPKRESERAIPRRGEEAEMAKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPADKPMIVVNYKGEEKQFAAEEISSMVLIKMREIAEAFLGNSVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKATSTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGASVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAERYKAEDEEHKKKVDAKNALENYAYNMRNTVKDDKIASKLGADDKKKVEEAIEGTISWLDANQLAEADEFEDKMKELEGICNPIIAKMYQGAAPDMGGGMGMDEDMPAGGGGAGPKIEEVD
Length737
PositionUnknown
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.06
Grand average of hydropathy-0.543
Instability index37.24
Isoelectric point6.67
Molecular weight81120.03
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23931
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     102.91|      23|      26|     121|     143|       1
---------------------------------------------------------------------------
  101-  119 (27.93/16.98)	..DLG..TTYSCVGVWQHDRVEI
  121-  143 (40.68/28.04)	ANDQGNRTTPSYVAFTDTERLIG
  145-  166 (34.30/22.51)	AAKNQVAMNPTNTVF.DAKRLIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.82|      14|      27|     659|     672|       3
---------------------------------------------------------------------------
  659-  672 (22.92/14.74)	DDKKKVEEAIEGTI
  687-  700 (25.90/17.66)	EDKMKELEGICNPI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.95|      11|      26|      51|      61|       5
---------------------------------------------------------------------------
   51-   61 (17.91/ 9.50)	KSKSERGKANR
   74-   84 (19.04/10.54)	KRESERAIPRR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.24|      18|      41|     425|     444|       6
---------------------------------------------------------------------------
  425-  444 (25.55/23.44)	VHDVVLVGGSTRipKVQQLL
  469-  486 (29.70/19.09)	VQAAILSGEGNE..KVQDLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.02|      11|      18|       1|      12|       7
---------------------------------------------------------------------------
    1-   12 (19.63/16.28)	AHSGPFQNhHPP
   21-   31 (21.39/11.83)	ARARTFQT.RPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.01|      23|      26|     546|     570|       9
---------------------------------------------------------------------------
  546-  570 (36.09/27.10)	DNNllGKFELSGIPPAPRGVPQITV
  575-  597 (36.91/21.62)	DAN..GILNVSAEDKTTGQKNKITI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     147.17|      51|     397|     198|     257|      10
---------------------------------------------------------------------------
  198-  257 (68.22/70.29)	NYKGeekQFAAEEISSMVLIKMREIAEAFLGN...SVKNAVvtvPAY.FNdsQRQATKDaGAIA
  599-  653 (78.94/52.44)	NDKG...RLSKEEIEKMVQEAERYKAEDEEHKkkvDAKNAL...ENYaYN..MRNTVKD.DKIA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23931 with Med37 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AAPDMGGGMGMDEDMPAGGGGAGPKIEEVD
2) AHSGPFQNHHPPPRSATARIARARTFQTRPPAASAIKPRPSPALPPHFRSKSKSERGKANRTRQTQRVFRRTPKRESERAIPRRGEEAEMAKGEGPA
708
1
737
97










Molecular Recognition Features






MoRF SequenceStartStop




1) PRSATARIARARTFQTRPPAASAIKPRPSPALPPHFRSK
13
51