<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23890
Description |
Uncharacterized protein |
Sequence | AAGGAQLASSPATVFRIRLKQPPASLKYKMRVPELCRNFSAVAWCGKLNAIACASETCARIPSSNSSPPFWIPIHILNPERPTECSVFNVRADSPRDFVQFIEWSPTSCPRSLLVANFHGRITIWTQPTKGPVNLVRDSSSWQCEHEWRQDLSVVTKWLSGISPYRWLPANSSTSNLKTFEEKFLTQHPQNSGWPNMLCVCSVFSSGSVQLHWSQWPPQNSAQPRWFSTSKGLLGAGPSGIMAADAIITESGALHVAGVPLVNPSTVVVWEVMPGLGNGIQATAKINATSPLPPSLNPPSWSGFAPLAAYLFSLQDYLVSEAAQTRKQIDNEITEAASIHCCPVSNFSAYVSPEAAAQSATTTTWGSGVTSVAFDPTRGGGVITVVIVEGQYMSPYDPDEGPSITGWRVQCWESSLQPVVLHPIFGSPSSFGGQPPMQTVWSTRVNKSITPTEDLKNPQTYVPMPTTSDERSSSECSVDRANRLSFDPYDLPNDVRQLAQIVYSAHGGEVAVAFLRGGVHIFSGPNFDQVDSYHVNVGSSIAPPAFSSSSCCLASVWHDTLKDRTILKIIRVLPPAILNVQTKVSSAVWERAIADRFWWSLMAGVDWWDAVGCTQSAAEDGIVSLNSVIALLDTDFHCLPTMQQRQQHCPNLDRIKCRLLEGTNAQDVRALVLDMQARLLLDMLGKGIESALINPSTLLPEPWQASSELLSNIEPDKMTVDPALLPSIQGYVDAVLDLASHFITRLRRYASFCRTLASHAVGASSSSGNSRNMVTSPTNNSPSPSNNQGNQGGVASATGSSQMQEWVQGAIAKISNNADGAANAAPNPVSGRSSFIPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCLLFRRRQSPRLLANAQKNPDSAMQKIQQLMNSKIEDSSSAISAVRSGLGAAKVEDGAATRGQLVLGAKGLEENPMGKSVRIGSGNAGQGYTSDEVKVLFLILVDLCRRTSGLQHPLPVSQVGTSNIIIRLHFIDGTYTVLPEVVEASLGPHMQNMPRPRGADAAGLLLRELELQPPSEEWHRRNMFGGPWSEPDDLGPLDNMPHLKIGGHINPHLSDMEEEGKTNFGIQSLWPRKRRLSERDAAFGLKTSVGLGAYLGVMGSRRDVITAVWKTGLDGEWYKV |
Length | 1152 |
Position | Tail |
Organism | Aegilops tauschii subsp. strangulata (Goatgrass) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
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Aromaticity | 0.07 |
Grand average of hydropathy | -0.165 |
Instability index | 49.44 |
Isoelectric point | 6.83 |
Molecular weight | 124924.33 |
Publications | PubMed=25035499
PubMed=29158546
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Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of transcription, DNA-templated GO:0006355 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP23890
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 187.89| 46| 114| 820| 865| 1
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820- 865 (82.42/53.34) GAANAAPNPVSGRSSFIPISINTGTFPGTPAVRLI....GDCHFLHRLCQ
883- 923 (37.81/20.21) ..ANAQKNPDSAMQK.IQQLMNSKIEDSSSAISAVrsglGAAKV......
936- 977 (67.67/42.38) GAKGLEENPM.GKSVRIG.SGNAGQGYTSDEVKVL......FLILVDLCR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 69.24| 18| 115| 85| 106| 2
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85- 106 (31.14/23.00) CSVFNvradSPRDFVQFIEWSP
201- 218 (38.10/19.20) CSVFS....SGSVQLHWSQWPP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 51.48| 14| 32| 260| 276| 3
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260- 276 (22.77/17.58) PLVNPSTvvvWEVMPGL
294- 307 (28.71/14.63) PSLNPPS...WSGFAPL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.29| 16| 411| 277| 293| 6
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277- 293 (25.35/19.74) GNGIQaTAKINATSPLP
685- 700 (28.94/17.71) GKGIE.SALINPSTLLP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 77.13| 22| 30| 543| 564| 10
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543- 564 (42.69/26.10) PPAFSSSSCCLAS.VWHDTLKDR
574- 596 (34.44/19.60) PPAILNVQTKVSSaVWERAIADR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 156.85| 48| 60| 1005| 1057| 14
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1005- 1057 (77.37/71.95) GTYTVLPEV.VEASLGPHMQNMpRPRGADAAGLllreLELQPPSEEWHRRN.MFG
1067- 1116 (79.48/57.60) GPLDNMPHLkIGGHINPHLSDM.EEEGKTNFGI....QSLWPRKRRLSERDaAFG
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