<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23870

Description Uncharacterized protein
SequenceEAPPALHGARDGRRRGRRGGRGAQGGRAGAQRLQIQRARPPVGARQLRPRRRPSRRLQAHPRPHPGPGRAHAKVGHLLPIDEVSTSVAEGELEKMWIEKQEMLQRCKDACDENKVVEAQVLLVEGKDVADTISSLVSQYQIHSLVVGNPPSKSPFTRRSSASRTACKICKSLPSFCTAYVVSKDGLSSVHVPESESGSPSGSPVPTGNSGSSSTKEVTDGTSSRSDLDGSSAPGLPSFTLNDYLTGNAPVYANKDRRIASRTGAESSILSQLRGSDKVPTSSLQELMLSDNKDDVSTGLEKLNLEPSHNRLLATASKDADRESRLEKPLVLPSDSYSMFTWEEIDNATASFSLKIGTGSNGTVYKGHLNHLDVAIKVLHSDDKSSTKHFNQELEVLSKIRHPHLLMLLGACPDRGCLVYEYMENGSLADRLQRRKGTPPIPWFDRFRIAWEIGSALVFLHSTKPSPIIHRDLKPENVLLDRNLVSKIGDVGLSTLMPPKETLSNRTVYKKTGLAGTLFYLDPEYQRTGQVSVKSDTYALGMVILELLTARCPIGLPEVVERAVEDGQISDVLDESAGDWPVREAHDLAQLGLNCLEMRSKDRPDLNSVVLEELGRLKRIAASVSGVALPGSPSHFKCPILKTVMYDPCIASDGYTYERSAMEMWLCDKDVSPVTKARLRDKTLLPNLSLKSAIMRWVAEGGRPVKE
Length706
PositionTail
OrganismAegilops tauschii subsp. strangulata (Goatgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Aegilops.
Aromaticity0.05
Grand average of hydropathy-0.449
Instability index49.62
Isoelectric point8.88
Molecular weight77269.97
Publications
PubMed=25035499
PubMed=29158546

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23870
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.73|      24|      61|     152|     211|       1
---------------------------------------------------------------------------
  152-  175 (43.30/63.78)	KSPFTRRSSASRTACKICKSLPSF
  215-  238 (41.43/ 7.21)	KEVTDGTSSRSDLDGSSAPGLPSF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     211.85|      68|     106|     272|     342|       2
---------------------------------------------------------------------------
  272-  342 (105.82/79.33)	LRGSDKVPTSSL.QEL.MLSDNKDdvSTGLEKLNLEPSHNRLLATASKD...ADRESRLEKPLVLP.SDSYSMfTWE
  378-  451 (106.03/68.60)	LHSDDKSSTKHFnQELeVLSKIRH..PHLLMLLGACPDRGCLVYEYMENgslADRLQRRKGTPPIPwFDRFRI.AWE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.35|      16|      35|       3|      18|       3
---------------------------------------------------------------------------
    3-   18 (30.45/14.70)	PPALHGARDGRRRGRR
   41-   56 (29.90/14.32)	PVGARQLRPRRRPSRR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.04|      16|     148|     357|     372|       4
---------------------------------------------------------------------------
  357-  372 (32.76/22.41)	TGSNGTVYK.....GHLNHLD
  501-  521 (25.29/15.78)	TLSNRTVYKktglaGTLFYLD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.01|      15|      16|      97|     111|       7
---------------------------------------------------------------------------
   97-  111 (28.27/19.67)	IEKQEMLQRCKDACD
  116-  130 (23.75/15.43)	VEAQVLLVEGKDVAD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.04|      11|      39|      21|      31|       9
---------------------------------------------------------------------------
   21-   31 (21.04/10.15)	RGAQG.GRAGAQ
   62-   73 (19.00/ 8.50)	RPHPGpGRAHAK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23870 with Med32 domain of Kingdom Viridiplantae
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