<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23847
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MDLAYICEWEKWPKSTHCPSGPLACTWSCRNLIAFTTDLRSDDQDLTRMIHILDTEHPWDVHSIRSEHSEAITCLEWDQSGSRLLSADADGQIKCWSMADHLANSWESPVGSVVEGDPIVALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQLYKVCVSVVNEKCRIDTELLPSLFMRCTTDLSRRDRLPAITHLKFLARDMSEQVLLCASSQTSSVVECWSLRKEGLPVNNIFQQLSPAVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLALAFHDGSVHIVHRLSLQTMAIFYSSAAPRPVDEPALKRPRTTGPTVHFKAMQLSWTSLALVGIDNHGRLSMLRISPSMGHSLDVGLALRHLLFLLEYCMVTGYDWWDILLHVQPGMVQSLVEKLHEEYTRQKAELQQVLSTRILAMKASLCKLSPCTVTRVCDYHAKLFLIAISSTLKSLLRPHVLNTPDKSPGDRLTEICAKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLASLPNQGSPLRPGHSFLRDGTSLGMLRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWICCRDEGPTSEPDEALVDECCLLPSQLLIPSLDWLPVSDGLVSRLQPKQPLRLHFGKAPALPGGSSSLQLDGLIRVPGQPKMDHLRRLHLGAYPTEACKACTRCGCVTMLKSPNKTTAVKQWEQRWIKNCLCGGLWWRMPLSYP |
Length | 829 |
Position | Tail |
Organism | Capra hircus (Goat) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Laurasiatheria> Artiodactyla> Ruminantia> Pecora> Bovidae>
Caprinae> Capra.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.018 |
Instability index | 49.72 |
Isoelectric point | 7.89 |
Molecular weight | 91862.75 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | catalytic activity GO:0003824 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP23847
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 192.18| 59| 195| 65| 124| 2
---------------------------------------------------------------------------
65- 124 (103.54/58.82) RSEHSEAITCLEW...DQSGSRLL..SADADGQIKCWSMADH...LANSWESPVGSVVEGDPIVaLSW
261- 327 (88.64/46.44) RRDRLPAITHLKFlarDMSEQVLLcaSSQTSSVVECWSLRKEglpVNNIFQQLSPAVGDKQPTI.LKW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 336.63| 105| 350| 366| 481| 3
---------------------------------------------------------------------------
366- 481 (160.45/129.30) PGLGLaLAFHDGsvhIVHRL.SLQTMAIFYSSAAPRPVDEPALKRP...RTTG.PTV.HFKAMQL.SWTSLALVGIDNHGRLSMLRiSPSmgHSLDVGLALRHllfLLEYCMVTGYdWWDILL
715- 826 (176.19/107.45) PSLDW.LPVSDG...LVSRLqPKQPLRLHFGKAPALPGGSSSLQLDgliRVPGqPKMdHLRRLHLgAYPTEACKACTRCGCVTMLK.SPN..KTTAVKQWEQR...WIKNCLCGGL.WWRMPL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 87.16| 27| 628| 28| 59| 6
---------------------------------------------------------------------------
28- 59 (37.40/39.98) SCrnLIAFTTdlRSDDQDLTRMIHILDTEHpW
659- 685 (49.75/31.05) SC..LPVYTA..TSDTQDSMSLLFRLLTKL.W
---------------------------------------------------------------------------
|