<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23841

Description 2660fd23-07db-4000-9060-4f32bd39e49a
SequenceMAANYWESTQRKHWQFTKDELAALRQRLDDEDPGLVHMFPLPQLRHLNIYFNQQINRLGKRLGVRQQAMATAQVYLKRFYTRTPIRQTNPYLVLTTALYLACKMEECPQHIRLLSQEARSLWPSDMHGHDASRVGECEFSLISEMNSQLIVHQPYRTLLALQDTFALTHDETSLAWMIINDHYMTDLPLLHPPHVVALTAVLLALVLRPSSNPTGAGGAGAGAGTGGGAATAAAAAGATGAAGGVAMAATALAQAQAQAQARAAAAATAGGSGAATTQPGFSSQGSQQAQTAGFSQGGSQGDGQQAAEPKKATDPRLGKVQRFAAWLADSSIDIEAMVDCTQELISFYECHEQYNDKHTREQISRFIKARGLDK
Length374
PositionKinase
OrganismThielavia terrestris
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Sordariomycetidae> Sordariales> Chaetomiaceae> Thermothielavioides.
Aromaticity0.07
Grand average of hydropathy-0.288
Instability index48.19
Isoelectric point6.89
Molecular weight40441.16
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
cyclin-dependent protein serine/threonine kinase regulator activity	GO:0016538	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23841
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      70.55|      15|      15|     224|     238|       1
---------------------------------------------------------------------------
  224-  238 (27.15/10.58)	GTGGGAATAAAAAGA
  270-  283 (20.89/ 6.69)	G.GSGAATTQPGFSS
  298-  312 (22.50/ 7.69)	GSQGDGQQAAEPKKA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.79|      10|      27|     214|     223|       2
---------------------------------------------------------------------------
  214-  223 (19.04/ 8.84)	TGAGGAGAGA
  239-  248 (18.75/ 8.60)	TGAAGGVAMA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.73|      23|      27|     139|     161|       3
---------------------------------------------------------------------------
  139-  161 (39.62/29.29)	FSLISEMNS..QLIVHQPYRTLLAL
  165-  189 (39.11/28.82)	FALTHDETSlaWMIINDHYMTDLPL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23841 with CycC domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AAAAATAGGSGAATTQPGFSSQGSQQAQTAGFSQGGSQGDGQQAAEPKKATDP
263
315










Molecular Recognition Features






MoRF SequenceStartStop




NANANA