<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23811

Description Cyclin-dependent kinase E-1 isoform B
SequenceMGDDSGSNRSKPEWLQQYDLIGKIGEGTYGLVFLARIKSSTNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHMDMSLYLAFDYAEHDLFEIIRHHRDKVNQSINQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKIFKVLVDIVTVPGHPTLEKWPSLANLPHWQQDSQHIQGHKYDNASLCSVLQLSPKSPAYDLLSKMLEYDPRKRITAAQALEHEYFKIEPLPGRNALVPCQPGDTFVNYPTRPVDTTTDFEGTANMQPSQPVSSGAAVSGNMPGGHVSNRSVPRPMNVGGMQRIPHQAMQGYNLSSQAGMGAGMNPGGIPMQRGVPQQQLRRKDQMGMPGYPPQQKSRRI
Length469
PositionKinase
OrganismGlycine soja (Wild soybean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Glycine> Glycine subgen. Soja.
Aromaticity0.07
Grand average of hydropathy-0.389
Instability index40.20
Isoelectric point8.96
Molecular weight52363.46
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23811
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     167.26|      40|      42|     382|     421|       1
---------------------------------------------------------------------------
  351-  378 (27.52/ 9.32)	...........PGDTFVNYP.TRPVDTttdfeGTAN......MQPS
  382-  421 (76.37/36.15)	SSGAAVSGNM.PGGHVSNRSVPRPMNV.....GGMQRIPHQAMQGY
  424-  460 (63.36/29.00)	SSQAGMGAGMnPGGIPMQRGVPQQ.........QLRRKDQMGMPGY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.35|      28|      42|     156|     185|       2
---------------------------------------------------------------------------
  156-  185 (44.16/32.88)	LVMGEGEEHGVVKIADFGLarIYQA..PLKPL
  201-  230 (45.19/27.54)	LLLGAKHYTSAVDMWAVGC..IFAEllTLKPL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      97.81|      28|      42|     262|     291|       3
---------------------------------------------------------------------------
  262-  291 (50.04/39.82)	PGHPTLEKWpsLANLPHWQQDSQHIQGHKY
  307-  334 (47.77/30.81)	PAYDLLSKM..LEYDPRKRITAAQALEHEY
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23811 with CDK8 domain of Kingdom Viridiplantae
Unable to open file!