<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23802

Description U-box domain-containing protein 35 isoform A
SequenceMSVQQPPCAAPLQNTTMVAVDKDKNSVHAFRWAVNHLDNPIIIAVHVKHKNFSHHVTNVFPPDEEDVANIFNTLRGMCTRKAVKMKEAVIDDSDVVRGLLEYANRNAIHSIVVGASTKNPLISLKKFKTYQYQDIPTAMIKSAPDYCSVYIISKLKIVSARSAVRSMSKGFMAPKQLPVQACPPSEPEGGSVRGQPPRSRSTYEGPVEPMRIQARERPRSAGSMSIDINIDVHTHPRHWSMDEREIAGLVTMDVTKQDSIPDVSDSFGTSGPQSSKELEAEMKRLRLELKQTMDMYSSACKQAISAKNQAEQIRQWKMEEDRKVEVVRLSQEAALALAEREKIRAKAALEAAEEARRRAEQDAQRRKDAEMKARLEAEEKERALSALAHNDNRYRKYTIVEIEAATEKFYPLNKIGEGGYGPVYKGHLDHTPVAIKILRPDAVHGMKQFQQEIEVLSCIRHPHMVLLLGACPEHGCLVYEYMDNGSLEDRLYRKNNSRPISWRKRFQIAAEIATALLFLHQNKPEPIVHRDLKPSNILLDRNYVSKISDVGLARLVPASVADTMTQYYMTSAAGTFCYIDPEYQQTGILTTKSDVYSLGIMLLQIITAKPPMGLAHIVKKAIEKGRFEEILDPVVTDWPVEEALSFAKLALKCSELSKKDRPNLATVVLPELNRLSELELTLHNDQVFYSSEGVINSYAACPPTPPRSHYSDSETLYTI
Length719
PositionTail
OrganismGlycine soja (Wild soybean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Glycine> Glycine subgen. Soja.
Aromaticity0.06
Grand average of hydropathy-0.418
Instability index51.44
Isoelectric point8.28
Molecular weight80851.78
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23802
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     261.78|      91|     287|      80|     183|       1
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   80-  183 (133.54/121.42)	RKAVKMKeAVIDDSDVVRGLLEYA...NRNAIHSIV.VGASTKN..PlisLKKFKTYQYQDI........PTAMIKSAPDycSVYIISKLKI.VSARSAVRSmskgfmaPKQ.LPVQACP
  366-  472 (128.24/84.01)	RKDAEMK.ARLEAEEKERALSALAhndNRYRKYTIVeIEAATEKfyP...LNKIGEGGYGPVykghldhtPVAIKILRPD..AVHGMKQFQQeIEVLSCIRH.......PHMvLLLGACP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.13|      12|      15|     212|     224|       3
---------------------------------------------------------------------------
  212-  224 (17.76/14.06)	IQARERPRSaGSM
  230-  241 (25.37/15.96)	IDVHTHPRH.WSM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.92|      22|      39|     299|     321|       4
---------------------------------------------------------------------------
  299-  321 (33.59/25.03)	ACKQAISAK...NQAEQIRQwKMEED
  338-  362 (30.34/16.52)	AEREKIRAKaalEAAEEARR.RAEQD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23802 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KQLPVQACPPSEPEGGSVRGQPPRSRSTYEGPVEPMRIQARERPRSAGSMSIDINIDVHTHPR
175
237










Molecular Recognition Features






MoRF SequenceStartStop




NANANA